RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 CRIP1P50238 77 aa9.27□□□□□ -0.93
CCL28-202ENST00000489442 Q6ZR54 194 aa9.27□□□□□ -0.93
CCL28-202ENST00000489442 COX8CQ7Z4L0 72 aa9.27□□□□□ -0.93
CCL28-202ENST00000489442 BAGE2Q86Y30 109 aa9.27□□□□□ -0.93
CCL28-202ENST00000489442 TXNDC17Q9BRA2 123 aa9.27□□□□□ -0.93
CCL28-202ENST00000489442 TMSB15BA0A087X1C1 80 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 NBDYA0A0U1RRE5 68 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 A0A1B0GVG6 124 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 GRIFINA4D1Z8 144 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 PGPEP1LA6NFU8 196 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 KRBOX1C9JBD0 128 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 CIDEAO60543 219 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 SRIP30626 198 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 ZNF674Q2M3X9 581 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 ZNF506Q5JVG8 444 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 C1orf134Q5TEV5 83 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 NEGR1Q7Z3B1 354 aa9.26□□□□□ -0.93
CCL28-202ENST00000489442 MRPS16Q9Y3D3 137 aaKnown RBP9.26□□□□□ -0.93
CCL28-202ENST00000489442 IGHV3-73A0A0B4J1V6 119 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 H3BVH4 76 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 SYT8Q8NBV8 401 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 PTH2Q96A98 100 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 UPK3BQ9BT76 320 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 IL36BQ9NZH7 164 aa9.25□□□□□ -0.93
CCL28-202ENST00000489442 DNAH2Q9P225 4427 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 K7EQD1 137 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 RS1O15537 224 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 ARMS2P0C7Q2 107 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 RPL35P42766 123 aaKnown RBP9.24□□□□□ -0.93
CCL28-202ENST00000489442 MEF2BQ02080 365 aaPredicted RBP9.24□□□□□ -0.93
CCL28-202ENST00000489442 TTC32Q5I0X7 151 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 PRR27Q6MZM9 219 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 ALKAL2Q6UX46 152 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 PHLDA3Q9Y5J5 127 aa9.24□□□□□ -0.93
CCL28-202ENST00000489442 PRSS29PA6NIE9 313 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 A8MWV9 139 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 RTL8CO15255 209 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 PDE6DO43924 150 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 GATA1P15976 413 aaPredicted RBP9.23□□□□□ -0.93
CCL28-202ENST00000489442 NKX2-5P52952 324 aaPredicted RBP9.23□□□□□ -0.93
CCL28-202ENST00000489442 LINC01559Q495D7 138 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 DNLZQ5SXM8 178 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 LYPD5Q6UWN5 251 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 PRADC1Q9BSG0 188 aa9.23□□□□□ -0.93
CCL28-202ENST00000489442 SIVA1O15304 175 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 NXPH4O95158 308 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 BCL2P10415 239 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 TAGLN2P37802 199 aaKnown RBP9.22□□□□□ -0.93
CCL28-202ENST00000489442 BLOC1S1P78537 153 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 RHOHQ15669 191 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 PIK3CD-AS1Q5SR53 167 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 SH2D6Q7Z4S9 175 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 SLC25A29Q8N8R3 303 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 C11orf52Q96A22 123 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 DERL1Q9BUN8 251 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 MLST8Q9BVC4 326 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 MED9Q9NWA0 146 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 VAX2Q9UIW0 290 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 BIRC6Q9NR09 4857 aa9.22□□□□□ -0.93
CCL28-202ENST00000489442 LOC100131303A0A0U1RQF7 123 aa9.21□□□□□ -0.94
CCL28-202ENST00000489442 TRBV6-4A0A1B0GX49 114 aa9.21□□□□□ -0.94
CCL28-202ENST00000489442 MGST1P10620 155 aaKnown RBP9.21□□□□□ -0.94
CCL28-202ENST00000489442 GNG4P50150 75 aa9.21□□□□□ -0.94
CCL28-202ENST00000489442 CENPWQ5EE01 88 aa9.21□□□□□ -0.94
CCL28-202ENST00000489442 C6orf223Q8N319 242 aa9.21□□□□□ -0.94
CCL28-202ENST00000489442 DAZAP1Q96EP5 407 aaKnown RBP9.21□□□□□ -0.94
CCL28-202ENST00000489442 DNAH17Q9UFH2 4485 aa9.2□□□□□ -0.94
CCL28-202ENST00000489442 HECTD4Q9Y4D8 3996 aa9.2□□□□□ -0.94
CCL28-202ENST00000489442 M0R381 172 aa9.2□□□□□ -0.94
CCL28-202ENST00000489442 RPL19P84098 196 aaKnown RBP9.2□□□□□ -0.94
CCL28-202ENST00000489442 ZFP2Q6ZN57 461 aa9.2□□□□□ -0.94
CCL28-202ENST00000489442 ZFP82Q8N141 532 aa9.2□□□□□ -0.94
CCL28-202ENST00000489442 PARLQ9H300 379 aa9.2□□□□□ -0.94
CCL28-202ENST00000489442 A0A1W2PPQ1 181 aa9.19□□□□□ -0.94
CCL28-202ENST00000489442 RAB19A4D1S5 217 aa9.19□□□□□ -0.94
CCL28-202ENST00000489442 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
CCL28-202ENST00000489442 JPT2Q9H910 190 aa9.19□□□□□ -0.94
CCL28-202ENST00000489442 RHODO00212 210 aa9.18□□□□□ -0.94
CCL28-202ENST00000489442 SCRT2Q9NQ03 307 aa9.18□□□□□ -0.94
CCL28-202ENST00000489442 TRAV9-2A0A087WT02 112 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 A0A087WWL8 130 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 CXCL1P09341 107 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 ZNF575Q86XF7 245 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 SMIM12Q96EX1 92 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 SFRP2Q96HF1 295 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 BIN3Q9NQY0 253 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 LY96Q9Y6Y9 160 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 FAT2Q9NYQ8 4349 aa9.17□□□□□ -0.94
CCL28-202ENST00000489442 RBFOX3A6NFN3 312 aa9.16□□□□□ -0.94
CCL28-202ENST00000489442 SSTP61278 116 aa9.16□□□□□ -0.94
CCL28-202ENST00000489442 SPANXN1Q5VSR9 72 aa9.16□□□□□ -0.94
CCL28-202ENST00000489442 Q6ZSN1 163 aa9.16□□□□□ -0.94
CCL28-202ENST00000489442 KRTAP1-5Q9BYS1 174 aa9.16□□□□□ -0.94
CCL28-202ENST00000489442 TRAV8-6A0A0B4J262 113 aa9.15□□□□□ -0.94
CCL28-202ENST00000489442 XKRY2A2RUG3 117 aa9.15□□□□□ -0.94
CCL28-202ENST00000489442 IGLV2-8P01709 118 aa9.15□□□□□ -0.94
CCL28-202ENST00000489442 P01737 135 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms