RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ZNF876PQ49A33 203 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 OR2D3Q8NGH3 330 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 OCC1Q8TAD7 63 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 IL36BQ9NZH7 164 aa7.77□□□□□ -1.17
UBE4B-210ENST00000488228 P01737 135 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 ARMS2P0C7Q2 107 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 DNLZQ5SXM8 178 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 POM121L12Q8N7R1 296 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 RASL10AQ92737 203 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 DAZAP1Q96EP5 407 aaKnown RBP7.76□□□□□ -1.17
UBE4B-210ENST00000488228 ZNF479Q96JC4 524 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 C18orf15Q96N68 181 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 RNASE7Q9H1E1 156 aaKnown RBP7.76□□□□□ -1.17
UBE4B-210ENST00000488228 APLNQ9ULZ1 77 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 HYDINQ4G0P3 5121 aa7.76□□□□□ -1.17
UBE4B-210ENST00000488228 RYR3Q15413 4870 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 TRAV26-1A0A087WT03 109 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 MUC21A0A0G2JKD1 596 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 A0A0J9YY99 117 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 MUC21A0A140T8X8 626 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 LINC01551Q86U37 167 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 OR10AG1Q8NH19 301 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 NDUFAF3Q9BU61 184 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 BIN3Q9NQY0 253 aa7.75□□□□□ -1.17
UBE4B-210ENST00000488228 DNAH6Q9C0G6 4158 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 TRAV4A0A0B4J268 109 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 M0R381 172 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 CXCL1P09341 107 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 NUDT10Q8NFP7 164 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 OR4C5Q8NGB2 326 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 NUDT11Q96G61 164 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 TPPP3Q9BW30 176 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 RPP21Q9H633 154 aaKnown RBP7.74□□□□□ -1.17
UBE4B-210ENST00000488228 SCRT2Q9NQ03 307 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 PHLDA3Q9Y5J5 127 aa7.74□□□□□ -1.17
UBE4B-210ENST00000488228 IGHV3-73A0A0B4J1V6 119 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 LCE6AA0A183 80 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 RS1O15537 224 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 MED14OSP0DP75 135 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 FHL2Q14192 279 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 ADIRFQ15847 76 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 SOHLH1Q5JUK2 328 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 CFAP126Q5VTH2 177 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 DMRTA1Q5VZB9 504 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 ZFP82Q8N141 532 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 SYT8Q8NBV8 401 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 LINC00476Q8WZB0 136 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 VSIG2Q96IQ7 327 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 FAM210BQ96KR6 192 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 SMDT1Q9H4I9 107 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 JPT2Q9H910 190 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 LY96Q9Y6Y9 160 aa7.73□□□□□ -1.17
UBE4B-210ENST00000488228 TRGV4A0A0C4DH28 118 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 SNAI2O43623 268 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 NXPH4O95158 308 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 NUDT3O95989 172 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 ERVFC1-1P60608 527 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 RPS20P60866 119 aaKnown RBP7.72□□□□□ -1.17
UBE4B-210ENST00000488228 SSTP61278 116 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 RPL23P62829 140 aaKnown RBP7.72□□□□□ -1.17
UBE4B-210ENST00000488228 FAM74A3Q4VXF1 159 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 COMMD7Q86VX2 200 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 PTH2Q96A98 100 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 NAT8Q9UHE5 227 aa7.72□□□□□ -1.17
UBE4B-210ENST00000488228 GATCO43716 136 aaKnown RBP7.71□□□□□ -1.18
UBE4B-210ENST00000488228 LY6G6CO95867 125 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 OR5AL1P0C617 328 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 TCTAP57738 103 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 TMEM241Q24JQ0 296 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 FAM74A4Q5TZK3 123 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 FAM231DQ6ZW35 169 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 C15orf53Q8NAA6 179 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 ISOC2Q96AB3 205 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 SSBP4Q9BWG4 385 aaPredicted RBP7.71□□□□□ -1.18
UBE4B-210ENST00000488228 SAMD10Q9BYL1 202 aa7.71□□□□□ -1.18
UBE4B-210ENST00000488228 A0A087WWL8 130 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 XKRY2A2RUG3 117 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 A8MWV9 139 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 PAX4O43316 350 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 CTRLP40313 264 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 CRYBA4P53673 196 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 SPANXN1Q5VSR9 72 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 PRO0255Q9UI72 69 aa7.7□□□□□ -1.18
UBE4B-210ENST00000488228 LOC100131303A0A0U1RQF7 123 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 GATA1P15976 413 aaPredicted RBP7.69□□□□□ -1.18
UBE4B-210ENST00000488228 PIK3CD-AS1Q5SR53 167 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 LYZL1Q6UWQ5 148 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 Q6ZSN1 163 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 GTSF1Q8WW33 167 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 SFRP2Q96HF1 295 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 OSTCQ9NRP0 149 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 HHLA3Q9XRX5 114 aa7.69□□□□□ -1.18
UBE4B-210ENST00000488228 A0A096LPF7 62 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 GYPEP15421 78 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 ADCYAP1P18509 176 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 CT83Q5H943 113 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 LGALS9CQ6DKI2 356 aa7.68□□□□□ -1.18
UBE4B-210ENST00000488228 UFSP1Q6NVU6 142 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms