RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 CFAP126Q5VTH2 177 aa16.27■□□□□ 0.2
RNF38-208ENST00000488058 TXNDC17Q9BRA2 123 aa16.27■□□□□ 0.2
RNF38-208ENST00000488058 GATA1P15976 413 aaPredicted RBP16.26■□□□□ 0.19
RNF38-208ENST00000488058 CRIP1P50238 77 aa16.26■□□□□ 0.19
RNF38-208ENST00000488058 NHLRC2Q8NBF2 726 aa16.26■□□□□ 0.19
RNF38-208ENST00000488058 FAM162BQ5T6X4 162 aa16.25■□□□□ 0.19
RNF38-208ENST00000488058 TCTE3Q8IZS6 198 aa16.25■□□□□ 0.19
RNF38-208ENST00000488058 TRBV6-1A0A0K0K1D8 114 aa16.24■□□□□ 0.19
RNF38-208ENST00000488058 SCO2A0A1W2PP80 73 aa16.24■□□□□ 0.19
RNF38-208ENST00000488058 GRIFINA4D1Z8 144 aa16.24■□□□□ 0.19
RNF38-208ENST00000488058 H3BVH4 76 aa16.24■□□□□ 0.19
RNF38-208ENST00000488058 LTAP01374 205 aa16.24■□□□□ 0.19
RNF38-208ENST00000488058 LGALSLQ3ZCW2 172 aaPredicted RBP16.24■□□□□ 0.19
RNF38-208ENST00000488058 TMSB15BA0A087X1C1 80 aa16.23■□□□□ 0.19
RNF38-208ENST00000488058 Q6ZNX1 250 aa16.23■□□□□ 0.19
RNF38-208ENST00000488058 SLC25A29Q8N8R3 303 aa16.23■□□□□ 0.19
RNF38-208ENST00000488058 PTH2Q96A98 100 aa16.23■□□□□ 0.19
RNF38-208ENST00000488058 PRADC1Q9BSG0 188 aa16.23■□□□□ 0.19
RNF38-208ENST00000488058 hCG_2014768A0A024R1R8 64 aa16.22■□□□□ 0.19
RNF38-208ENST00000488058 KRBOX1C9JBD0 128 aa16.22■□□□□ 0.19
RNF38-208ENST00000488058 CIDEAO60543 219 aa16.22■□□□□ 0.19
RNF38-208ENST00000488058 EIF5AL1Q6IS14 154 aaKnown RBP16.22■□□□□ 0.19
RNF38-208ENST00000488058 COX8CQ7Z4L0 72 aa16.22■□□□□ 0.19
RNF38-208ENST00000488058 LINC00315P59091 139 aa16.21■□□□□ 0.19
RNF38-208ENST00000488058 RHOHQ15669 191 aa16.21■□□□□ 0.19
RNF38-208ENST00000488058 WFDC10BQ8IUB3 73 aa16.21■□□□□ 0.19
RNF38-208ENST00000488058 IL36BQ9NZH7 164 aa16.21■□□□□ 0.19
RNF38-208ENST00000488058 GNG13Q9P2W3 67 aa16.21■□□□□ 0.19
RNF38-208ENST00000488058 S100A9P06702 114 aaKnown RBP16.2■□□□□ 0.18
RNF38-208ENST00000488058 ARMS2P0C7Q2 107 aa16.2■□□□□ 0.18
RNF38-208ENST00000488058 ZNF674Q2M3X9 581 aa16.2■□□□□ 0.18
RNF38-208ENST00000488058 SH2D6Q7Z4S9 175 aa16.2■□□□□ 0.18
RNF38-208ENST00000488058 ZNF575Q86XF7 245 aa16.2■□□□□ 0.18
RNF38-208ENST00000488058 TRBV6-4A0A1B0GX49 114 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 A8MWV9 139 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 C1QBP02746 253 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 RAB5CP51148 216 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 CCL20P78556 96 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 SYT8Q8NBV8 401 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 PARLQ9H300 379 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 LY96Q9Y6Y9 160 aa16.19■□□□□ 0.18
RNF38-208ENST00000488058 MGST1P10620 155 aaKnown RBP16.18■□□□□ 0.18
RNF38-208ENST00000488058 LINC01559Q495D7 138 aa16.18■□□□□ 0.18
RNF38-208ENST00000488058 BAGE2Q86Y30 109 aa16.18■□□□□ 0.18
RNF38-208ENST00000488058 JPT2Q9H910 190 aa16.18■□□□□ 0.18
RNF38-208ENST00000488058 MANBALQ9NQG1 85 aa16.18■□□□□ 0.18
RNF38-208ENST00000488058 TEX46H3BTG2 121 aa16.17■□□□□ 0.18
RNF38-208ENST00000488058 AKAP14Q86UN6 197 aa16.17■□□□□ 0.18
RNF38-208ENST00000488058 TRAV9-2A0A087WT02 112 aa16.16■□□□□ 0.18
RNF38-208ENST00000488058 BTF3P20290 206 aaKnown RBP16.16■□□□□ 0.18
RNF38-208ENST00000488058 SULT1A2P50226 295 aa16.16■□□□□ 0.18
RNF38-208ENST00000488058 DNLZQ5SXM8 178 aa16.16■□□□□ 0.18
RNF38-208ENST00000488058 DMRTA1Q5VZB9 504 aa16.16■□□□□ 0.18
RNF38-208ENST00000488058 PHLDA3Q9Y5J5 127 aa16.16■□□□□ 0.18
RNF38-208ENST00000488058 PKD1P98161 4303 aa16.15■□□□□ 0.18
RNF38-208ENST00000488058 PIK3CD-AS1Q5SR53 167 aa16.15■□□□□ 0.18
RNF38-208ENST00000488058 PRR27Q6MZM9 219 aa16.15■□□□□ 0.18
RNF38-208ENST00000488058 SLC51BQ86UW2 128 aa16.15■□□□□ 0.18
RNF38-208ENST00000488058 SAMD10Q9BYL1 202 aa16.15■□□□□ 0.18
RNF38-208ENST00000488058 TRAV1-1A0A0B4J248 108 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 M0R381 172 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 EVI2AP22794 236 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 FAM74A4Q5TZK3 123 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 ZFP2Q6ZN57 461 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 Q6ZSN1 163 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 TNFRSF18Q9Y5U5 241 aa16.14■□□□□ 0.17
RNF38-208ENST00000488058 C16orf90A8MZG2 172 aa16.13■□□□□ 0.17
RNF38-208ENST00000488058 MED14OSP0DP75 135 aa16.13■□□□□ 0.17
RNF38-208ENST00000488058 RPL19P84098 196 aaKnown RBP16.13■□□□□ 0.17
RNF38-208ENST00000488058 GAGE12JA6NER3 117 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 RPL35P42766 123 aaKnown RBP16.12■□□□□ 0.17
RNF38-208ENST00000488058 TIRAPP58753 221 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 GAGE1Q13065 139 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 GAGE4Q13068 117 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 GAGE5Q13069 117 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 GAGE13Q4V321 117 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 OR10J3Q5JRS4 329 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 ATP6V0E2Q8NHE4 81 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 DERL1Q9BUN8 251 aa16.12■□□□□ 0.17
RNF38-208ENST00000488058 PKHD1P08F94 4074 aa16.11■□□□□ 0.17
RNF38-208ENST00000488058 DNAH10OSP0CZ25 163 aa16.11■□□□□ 0.17
RNF38-208ENST00000488058 SPATA12Q7Z6I5 190 aa16.11■□□□□ 0.17
RNF38-208ENST00000488058 ZFP82Q8N141 532 aa16.11■□□□□ 0.17
RNF38-208ENST00000488058 MLST8Q9BVC4 326 aa16.11■□□□□ 0.17
RNF38-208ENST00000488058 A0A087WWL8 130 aa16.1■□□□□ 0.17
RNF38-208ENST00000488058 TRAV8-6A0A0B4J262 113 aa16.1■□□□□ 0.17
RNF38-208ENST00000488058 RHODO00212 210 aa16.1■□□□□ 0.17
RNF38-208ENST00000488058 IFNA1P01562 189 aa16.1■□□□□ 0.17
RNF38-208ENST00000488058 Q6ZRN7 208 aaPredicted RBP16.1■□□□□ 0.17
RNF38-208ENST00000488058 C11orf52Q96A22 123 aa16.1■□□□□ 0.17
RNF38-208ENST00000488058 SCRT2Q9NQ03 307 aa16.1■□□□□ 0.17
RNF38-208ENST00000488058 DYNC1H1Q14204 4646 aaKnown RBP16.09■□□□□ 0.17
RNF38-208ENST00000488058 IGHV3-38A0A0C4DH36 116 aa16.09■□□□□ 0.17
RNF38-208ENST00000488058 CRYGDP07320 174 aa16.09■□□□□ 0.17
RNF38-208ENST00000488058 UFSP1Q6NVU6 142 aa16.09■□□□□ 0.17
RNF38-208ENST00000488058 C9orf62Q8N4C0 152 aa16.09■□□□□ 0.17
RNF38-208ENST00000488058 C14orf178Q8N769 122 aaPredicted RBP16.09■□□□□ 0.17
RNF38-208ENST00000488058 SFRP2Q96HF1 295 aa16.09■□□□□ 0.17
RNF38-208ENST00000488058 MSRB1Q9NZV6 116 aa16.09■□□□□ 0.17
RNF38-208ENST00000488058 KIAA1109Q2LD37 5005 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms