RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 C9JCJ5 164 aa11.78□□□□□ -0.52
HMG20B-212ENST00000487894 ZNF674Q2M3X9 581 aa11.78□□□□□ -0.52
HMG20B-212ENST00000487894 ZNF876PQ49A33 203 aa11.78□□□□□ -0.52
HMG20B-212ENST00000487894 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
HMG20B-212ENST00000487894 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 B4DEV8 164 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 RTL8CO15255 209 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 S100A9P06702 114 aaKnown RBP11.77□□□□□ -0.53
HMG20B-212ENST00000487894 ZNF506Q5JVG8 444 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 FAM162BQ5T6X4 162 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 NHLRC2Q8NBF2 726 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 PTH2Q96A98 100 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 UPK3BQ9BT76 320 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 MRPS16Q9Y3D3 137 aaKnown RBP11.77□□□□□ -0.53
HMG20B-212ENST00000487894 PKD1P98161 4303 aa11.77□□□□□ -0.53
HMG20B-212ENST00000487894 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
HMG20B-212ENST00000487894 TEX46H3BTG2 121 aa11.76□□□□□ -0.53
HMG20B-212ENST00000487894 M0R036 132 aa11.76□□□□□ -0.53
HMG20B-212ENST00000487894 ORM1P02763 201 aa11.76□□□□□ -0.53
HMG20B-212ENST00000487894 ASIPP42127 132 aa11.76□□□□□ -0.53
HMG20B-212ENST00000487894 C11orf52Q96A22 123 aa11.76□□□□□ -0.53
HMG20B-212ENST00000487894 NBDYA0A0U1RRE5 68 aa11.75□□□□□ -0.53
HMG20B-212ENST00000487894 RS1O15537 224 aa11.75□□□□□ -0.53
HMG20B-212ENST00000487894 S100A4P26447 101 aaKnown RBP11.75□□□□□ -0.53
HMG20B-212ENST00000487894 DNLZQ5SXM8 178 aa11.75□□□□□ -0.53
HMG20B-212ENST00000487894 CFAP126Q5VTH2 177 aa11.75□□□□□ -0.53
HMG20B-212ENST00000487894 ZNF575Q86XF7 245 aa11.75□□□□□ -0.53
HMG20B-212ENST00000487894 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
HMG20B-212ENST00000487894 H3BVH4 76 aa11.74□□□□□ -0.53
HMG20B-212ENST00000487894 K7EQD1 137 aa11.74□□□□□ -0.53
HMG20B-212ENST00000487894 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
HMG20B-212ENST00000487894 MRPL23Q16540 153 aaKnown RBP11.74□□□□□ -0.53
HMG20B-212ENST00000487894 LINC00336Q6ZUF6 198 aa11.74□□□□□ -0.53
HMG20B-212ENST00000487894 TXNDC17Q9BRA2 123 aa11.74□□□□□ -0.53
HMG20B-212ENST00000487894 DERL1Q9BUN8 251 aa11.74□□□□□ -0.53
HMG20B-212ENST00000487894 IL36BQ9NZH7 164 aa11.74□□□□□ -0.53
HMG20B-212ENST00000487894 GRIFINA4D1Z8 144 aa11.73□□□□□ -0.53
HMG20B-212ENST00000487894 GYPEP15421 78 aa11.73□□□□□ -0.53
HMG20B-212ENST00000487894 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
HMG20B-212ENST00000487894 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
HMG20B-212ENST00000487894 TNP2Q05952 138 aa11.73□□□□□ -0.53
HMG20B-212ENST00000487894 BAGE2Q86Y30 109 aa11.73□□□□□ -0.53
HMG20B-212ENST00000487894 Q9H8V8 135 aa11.73□□□□□ -0.53
HMG20B-212ENST00000487894 TMSB15BA0A087X1C1 80 aa11.72□□□□□ -0.53
HMG20B-212ENST00000487894 LOC100131303A0A0U1RQF7 123 aa11.72□□□□□ -0.53
HMG20B-212ENST00000487894 IFNA1P01562 189 aa11.72□□□□□ -0.53
HMG20B-212ENST00000487894 MEF2BQ02080 365 aaPredicted RBP11.72□□□□□ -0.53
HMG20B-212ENST00000487894 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
HMG20B-212ENST00000487894 ALKAL2Q6UX46 152 aa11.72□□□□□ -0.53
HMG20B-212ENST00000487894 PCNPQ8WW12 178 aaKnown RBP11.72□□□□□ -0.53
HMG20B-212ENST00000487894 PKHD1P08F94 4074 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 CIDEAO60543 219 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 ARMS2P0C7Q2 107 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 BCL2P10415 239 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 SRIP30626 198 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 C1orf134Q5TEV5 83 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 NEGR1Q7Z3B1 354 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 KRTAP1-5Q9BYS1 174 aa11.71□□□□□ -0.53
HMG20B-212ENST00000487894 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
HMG20B-212ENST00000487894 RPL19P84098 196 aaKnown RBP11.7□□□□□ -0.54
HMG20B-212ENST00000487894 LYPD5Q6UWN5 251 aa11.7□□□□□ -0.54
HMG20B-212ENST00000487894 SLC25A29Q8N8R3 303 aa11.7□□□□□ -0.54
HMG20B-212ENST00000487894 PARLQ9H300 379 aa11.7□□□□□ -0.54
HMG20B-212ENST00000487894 SCRT2Q9NQ03 307 aa11.7□□□□□ -0.54
HMG20B-212ENST00000487894 A0A1B0GVY2 172 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 A8MWV9 139 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 PDE6DO43924 150 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 NXPH4O95158 308 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 CENPWQ5EE01 88 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 PRR27Q6MZM9 219 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 KRTAP17-1Q9BYP8 105 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 JPT2Q9H910 190 aa11.69□□□□□ -0.54
HMG20B-212ENST00000487894 TRBV6-4A0A1B0GX49 114 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 IGLV2-8P01709 118 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 CXCL1P09341 107 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 RHOHQ15669 191 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 TTC32Q5I0X7 151 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 SOHLH1Q5JUK2 328 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 C6orf223Q8N319 242 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 VAX2Q9UIW0 290 aa11.68□□□□□ -0.54
HMG20B-212ENST00000487894 DNAH11Q96DT5 4516 aa11.67□□□□□ -0.54
HMG20B-212ENST00000487894 MGST1P10620 155 aaKnown RBP11.67□□□□□ -0.54
HMG20B-212ENST00000487894 UFSP1Q6NVU6 142 aa11.67□□□□□ -0.54
HMG20B-212ENST00000487894 ZFP2Q6ZN57 461 aa11.67□□□□□ -0.54
HMG20B-212ENST00000487894 SYT8Q8NBV8 401 aa11.67□□□□□ -0.54
HMG20B-212ENST00000487894 SAMD10Q9BYL1 202 aa11.67□□□□□ -0.54
HMG20B-212ENST00000487894 PHLDA3Q9Y5J5 127 aa11.67□□□□□ -0.54
HMG20B-212ENST00000487894 TRBV20OR9-2A0A075B6H5 130 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 A0A1W2PPQ1 181 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 RAB19A4D1S5 217 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 SIVA1O15304 175 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 MED14OSP0DP75 135 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 TAGLN2P37802 199 aaKnown RBP11.66□□□□□ -0.54
HMG20B-212ENST00000487894 BLOC1S1P78537 153 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 PRADC1Q9BSG0 188 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 MED9Q9NWA0 146 aa11.66□□□□□ -0.54
HMG20B-212ENST00000487894 M0R381 172 aa11.65□□□□□ -0.54
HMG20B-212ENST00000487894 GNG4P50150 75 aa11.65□□□□□ -0.54
HMG20B-212ENST00000487894 Q6ZSN1 163 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms