RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 CIDEAO60543 219 aa13.99□□□□□ -0.17
HDAC4-209ENST00000487617 SH2D1AO60880 128 aa13.99□□□□□ -0.17
HDAC4-209ENST00000487617 H2AFB1P0C5Y9 115 aa13.99□□□□□ -0.17
HDAC4-209ENST00000487617 CRIP1P50238 77 aa13.99□□□□□ -0.17
HDAC4-209ENST00000487617 COX8CQ7Z4L0 72 aa13.99□□□□□ -0.17
HDAC4-209ENST00000487617 IGHV3-73A0A0B4J1V6 119 aa13.98□□□□□ -0.17
HDAC4-209ENST00000487617 TRBV6-1A0A0K0K1D8 114 aa13.98□□□□□ -0.17
HDAC4-209ENST00000487617 M0R036 132 aa13.98□□□□□ -0.17
HDAC4-209ENST00000487617 FAM162BQ5T6X4 162 aa13.98□□□□□ -0.17
HDAC4-209ENST00000487617 NHLRC2Q8NBF2 726 aa13.98□□□□□ -0.17
HDAC4-209ENST00000487617 LTAP01374 205 aa13.97□□□□□ -0.17
HDAC4-209ENST00000487617 BTF3P20290 206 aaKnown RBP13.97□□□□□ -0.17
HDAC4-209ENST00000487617 SH2D6Q7Z4S9 175 aa13.97□□□□□ -0.17
HDAC4-209ENST00000487617 TCTE3Q8IZS6 198 aa13.97□□□□□ -0.17
HDAC4-209ENST00000487617 SLC25A29Q8N8R3 303 aa13.97□□□□□ -0.17
HDAC4-209ENST00000487617 KRBOX1C9JBD0 128 aa13.96□□□□□ -0.17
HDAC4-209ENST00000487617 LINC00315P59091 139 aa13.96□□□□□ -0.17
HDAC4-209ENST00000487617 LGALSLQ3ZCW2 172 aaPredicted RBP13.96□□□□□ -0.17
HDAC4-209ENST00000487617 ZNF575Q86XF7 245 aa13.96□□□□□ -0.17
HDAC4-209ENST00000487617 PRADC1Q9BSG0 188 aa13.96□□□□□ -0.17
HDAC4-209ENST00000487617 IL36BQ9NZH7 164 aa13.96□□□□□ -0.17
HDAC4-209ENST00000487617 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
HDAC4-209ENST00000487617 SCO2A0A1W2PP80 73 aa13.95□□□□□ -0.18
HDAC4-209ENST00000487617 H3BVH4 76 aa13.95□□□□□ -0.18
HDAC4-209ENST00000487617 RHOHQ15669 191 aa13.95□□□□□ -0.18
HDAC4-209ENST00000487617 ZNF674Q2M3X9 581 aa13.95□□□□□ -0.18
HDAC4-209ENST00000487617 GRIFINA4D1Z8 144 aa13.94□□□□□ -0.18
HDAC4-209ENST00000487617 S100A9P06702 114 aaKnown RBP13.94□□□□□ -0.18
HDAC4-209ENST00000487617 PIK3CD-AS1Q5SR53 167 aa13.94□□□□□ -0.18
HDAC4-209ENST00000487617 EIF5AL1Q6IS14 154 aaKnown RBP13.94□□□□□ -0.18
HDAC4-209ENST00000487617 LY96Q9Y6Y9 160 aa13.94□□□□□ -0.18
HDAC4-209ENST00000487617 TRAV9-2A0A087WT02 112 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 A8MWV9 139 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 MED14OSP0DP75 135 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 MGST1P10620 155 aaKnown RBP13.93□□□□□ -0.18
HDAC4-209ENST00000487617 DNLZQ5SXM8 178 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 Q6ZNX1 250 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 WFDC10BQ8IUB3 73 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 PARLQ9H300 379 aa13.93□□□□□ -0.18
HDAC4-209ENST00000487617 TMSB15BA0A087X1C1 80 aa13.92□□□□□ -0.18
HDAC4-209ENST00000487617 ARMS2P0C7Q2 107 aa13.92□□□□□ -0.18
HDAC4-209ENST00000487617 RAB5CP51148 216 aa13.92□□□□□ -0.18
HDAC4-209ENST00000487617 LINC01559Q495D7 138 aa13.92□□□□□ -0.18
HDAC4-209ENST00000487617 SYT8Q8NBV8 401 aa13.92□□□□□ -0.18
HDAC4-209ENST00000487617 TIRAPP58753 221 aa13.91□□□□□ -0.18
HDAC4-209ENST00000487617 CCL20P78556 96 aa13.91□□□□□ -0.18
HDAC4-209ENST00000487617 DMRTA1Q5VZB9 504 aa13.91□□□□□ -0.18
HDAC4-209ENST00000487617 ZFP2Q6ZN57 461 aa13.91□□□□□ -0.18
HDAC4-209ENST00000487617 JPT2Q9H910 190 aa13.91□□□□□ -0.18
HDAC4-209ENST00000487617 GNG13Q9P2W3 67 aa13.91□□□□□ -0.18
HDAC4-209ENST00000487617 C16orf90A8MZG2 172 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 C1QBP02746 253 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 EVI2AP22794 236 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 Q6ZSN1 163 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 BAGE2Q86Y30 109 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 MANBALQ9NQG1 85 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 PHLDA3Q9Y5J5 127 aa13.9□□□□□ -0.18
HDAC4-209ENST00000487617 TRAV1-1A0A0B4J248 108 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 TEX46H3BTG2 121 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 DNAH10OSP0CZ25 163 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 SULT1A2P50226 295 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 SAMD10Q9BYL1 202 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 TNFRSF18Q9Y5U5 241 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 PKD1P98161 4303 aa13.89□□□□□ -0.19
HDAC4-209ENST00000487617 Q6ZRN7 208 aaPredicted RBP13.88□□□□□ -0.19
HDAC4-209ENST00000487617 SCRT2Q9NQ03 307 aa13.88□□□□□ -0.19
HDAC4-209ENST00000487617 PKHD1P08F94 4074 aa13.88□□□□□ -0.19
HDAC4-209ENST00000487617 hCG_2014768A0A024R1R8 64 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 K7EP13 123 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 SPATA12Q7Z6I5 190 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 AKAP14Q86UN6 197 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 NFE4Q86UQ8 179 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 SLC51BQ86UW2 128 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 ATP6V0E2Q8NHE4 81 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 MLST8Q9BVC4 326 aa13.87□□□□□ -0.19
HDAC4-209ENST00000487617 TRAV8-6A0A0B4J262 113 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 IGHV3-38A0A0C4DH36 116 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 M0R381 172 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 RHODO00212 210 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 CRYGDP07320 174 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 RPL35P42766 123 aaKnown RBP13.86□□□□□ -0.19
HDAC4-209ENST00000487617 OR10J3Q5JRS4 329 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 UFSP1Q6NVU6 142 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 MSRB1Q9NZV6 116 aa13.86□□□□□ -0.19
HDAC4-209ENST00000487617 DNAH11Q96DT5 4516 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 GAGE12JA6NER3 117 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 RPL19P84098 196 aaKnown RBP13.85□□□□□ -0.19
HDAC4-209ENST00000487617 GAGE1Q13065 139 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 GAGE4Q13068 117 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 GAGE5Q13069 117 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 GAGE13Q4V321 117 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 FAM74A4Q5TZK3 123 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 PRR27Q6MZM9 219 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 ZFP82Q8N141 532 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 C11orf52Q96A22 123 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 GTSF1LQ9H1H1 148 aa13.85□□□□□ -0.19
HDAC4-209ENST00000487617 A0A087WWL8 130 aa13.84□□□□□ -0.19
HDAC4-209ENST00000487617 LELP1Q5T871 98 aa13.84□□□□□ -0.19
HDAC4-209ENST00000487617 C10orf126Q8N4M7 172 aa13.84□□□□□ -0.19
HDAC4-209ENST00000487617 C14orf178Q8N769 122 aaPredicted RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms