RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 IGLV2-11P01706 119 aa9.06□□□□□ -0.96
TRA2B-214ENST00000487615 SRSF2Q01130 221 aaKnown RBP9.06□□□□□ -0.96
TRA2B-214ENST00000487615 USP9XQ93008 2570 aaPredicted RBP9.06□□□□□ -0.96
TRA2B-214ENST00000487615 SORL1Q92673 2214 aa9.06□□□□□ -0.96
TRA2B-214ENST00000487615 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
TRA2B-214ENST00000487615 FOXI2Q6ZQN5 318 aa9.06□□□□□ -0.96
TRA2B-214ENST00000487615 GPHB5Q86YW7 130 aa9.06□□□□□ -0.96
TRA2B-214ENST00000487615 NEGR1Q7Z3B1 354 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 RHODO00212 210 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 RPL36AP83881 106 aaKnown RBP9.05□□□□□ -0.96
TRA2B-214ENST00000487615 RPL36ALQ969Q0 106 aaKnown RBP9.05□□□□□ -0.96
TRA2B-214ENST00000487615 XCL2Q9UBD3 114 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 TRGV4A0A0C4DH28 118 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 K7EMI3 77 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 CRIP1P50238 77 aa9.05□□□□□ -0.96
TRA2B-214ENST00000487615 DEFB1P60022 68 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 DEFB136Q30KP8 78 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 A8MWV9 139 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 PMVKQ15126 192 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 BVES-AS1Q5T3Y7 98 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 TMEM141Q96I45 108 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 A0A1B0GWB2 263 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 TMEM89A2RUT3 159 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 HLA-DRB4P13762 266 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 SFTA2Q6UW10 78 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 HLA-DRB4X5D2U9 266 aa9.04□□□□□ -0.96
TRA2B-214ENST00000487615 TRAV2A0A0B4J234 112 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 IGLC6P0CF74 106 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 SMAD5-AS1Q9Y6J3 95 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 SONP18583 2426 aaKnown RBP9.03□□□□□ -0.96
TRA2B-214ENST00000487615 A0A087WX48 190 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 IGKV3D-20A0A0C4DH25 116 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 A0A1W2PPR1 153 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 NPSP0C0P6 89 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 C1QTNF4Q9BXJ3 329 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 HIVEP2P31629 2446 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 TMEM262E9PQX1 116 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 I3L3M4 83 aa9.03□□□□□ -0.96
TRA2B-214ENST00000487615 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 RPL35AP18077 110 aaKnown RBP9.02□□□□□ -0.97
TRA2B-214ENST00000487615 GAGE1Q13065 139 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 ANKRD39Q53RE8 183 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 IGHV4OR15-8A0A075B7B6 117 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 A0A087WW49 117 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 TMEM238C9JI98 176 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 SIVA1O15304 175 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 SLURP1P55000 103 aa9.02□□□□□ -0.97
TRA2B-214ENST00000487615 PHLDA1Q8WV24 401 aaPredicted RBP9.02□□□□□ -0.97
TRA2B-214ENST00000487615 RPL39LQ96EH5 51 aaKnown RBP9.02□□□□□ -0.97
TRA2B-214ENST00000487615 J3QKU1 62 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 IGHG4P01861 327 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 LOXL1Q08397 574 aaPredicted RBP9.01□□□□□ -0.97
TRA2B-214ENST00000487615 SCRT2Q9NQ03 307 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 PCP4P48539 62 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 MRGPRG-AS1Q2M3A8 158 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 PCP2Q8IVA1 136 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 TOMM7Q9P0U1 55 aa9.01□□□□□ -0.97
TRA2B-214ENST00000487615 MED14OSP0DP75 135 aa9□□□□□ -0.97
TRA2B-214ENST00000487615 PRADC1Q9BSG0 188 aa9□□□□□ -0.97
TRA2B-214ENST00000487615 SZT2Q5T011 3432 aa9□□□□□ -0.97
TRA2B-214ENST00000487615 NACAE9PAV3 2078 aa9□□□□□ -0.97
TRA2B-214ENST00000487615 SPATA12Q7Z6I5 190 aa9□□□□□ -0.97
TRA2B-214ENST00000487615 TRBV7-9A0A0J9YWB2 115 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 VWC2LB2RUY7 222 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 PRSS29PA6NIE9 313 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 ADARB2-AS1A8MUL3 147 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 LINC00310P59036 64 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 MYMXA0A1B0GTQ4 84 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 C9orf118A6NHY6 69 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 CRXO43186 299 aaPredicted RBP8.99□□□□□ -0.97
TRA2B-214ENST00000487615 CHCHD5Q9BSY4 110 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 SPXQ9BT56 116 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
TRA2B-214ENST00000487615 IGHV3-16A0A0C4DH30 117 aa8.98□□□□□ -0.97
TRA2B-214ENST00000487615 MRPS12O15235 138 aaKnown RBP8.98□□□□□ -0.97
TRA2B-214ENST00000487615 DEFB125Q8N687 156 aa8.98□□□□□ -0.97
TRA2B-214ENST00000487615 M0R2P5 195 aa8.98□□□□□ -0.97
TRA2B-214ENST00000487615 SUMO4Q6EEV6 95 aa8.98□□□□□ -0.97
TRA2B-214ENST00000487615 Q6ZVH6 145 aa8.98□□□□□ -0.97
TRA2B-214ENST00000487615 RNF114Q9Y508 228 aa8.98□□□□□ -0.97
TRA2B-214ENST00000487615 SPAG8Q99932 426 aaPredicted RBP8.97□□□□□ -0.97
TRA2B-214ENST00000487615 C2CD3Q4AC94 2353 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 GAGE13Q4V321 117 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 LRRK2Q5S007 2527 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 TRAV8-2A0A0B4J237 113 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 A0A0J9YX75 114 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 RHOHQ15669 191 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 Q8N1Y9 231 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 PGPEP1Q9NXJ5 209 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 DSCAML1Q8TD84 2053 aa8.97□□□□□ -0.97
TRA2B-214ENST00000487615 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.97□□□□□ -0.97
TRA2B-214ENST00000487615 CCL24O00175 119 aa8.96□□□□□ -0.97
TRA2B-214ENST00000487615 AZU1P20160 251 aa8.96□□□□□ -0.97
TRA2B-214ENST00000487615 ERG28Q9UKR5 140 aa8.96□□□□□ -0.97
TRA2B-214ENST00000487615 TAL2Q16559 108 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms