RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CIDEAO60543 219 aa12.82□□□□□ -0.36
SMPDL3A-202ENST00000487215 MBP02144 154 aa12.82□□□□□ -0.36
SMPDL3A-202ENST00000487215 CDC34P49427 236 aaPredicted RBP12.82□□□□□ -0.36
SMPDL3A-202ENST00000487215 LINC01620Q4KN68 170 aa12.82□□□□□ -0.36
SMPDL3A-202ENST00000487215 KRTAP10-4P60372 401 aaPredicted RBP12.81□□□□□ -0.36
SMPDL3A-202ENST00000487215 C5orf17Q8NAS9 161 aa12.81□□□□□ -0.36
SMPDL3A-202ENST00000487215 OR2G3Q8NGZ4 309 aa12.81□□□□□ -0.36
SMPDL3A-202ENST00000487215 TRAV8-3A0A0A6YYJ7 113 aa12.8□□□□□ -0.36
SMPDL3A-202ENST00000487215 ARL14EPLP0DKL9 152 aa12.8□□□□□ -0.36
SMPDL3A-202ENST00000487215 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
SMPDL3A-202ENST00000487215 TAAR5O14804 337 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 HMGB3O15347 200 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 STAG3L2P0CL84 134 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 STAG3L3P0CL85 134 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 MGST1P10620 155 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 GNG5P63218 68 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 SERF2P84101 59 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 DAZ4Q86SG3 579 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 BAALCQ8WXS3 180 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 C9orf85Q96MD7 179 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 DAZ3Q9NR90 486 aaKnown RBP12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
SMPDL3A-202ENST00000487215 ZFP69Q49AA0 526 aa12.78□□□□□ -0.36
SMPDL3A-202ENST00000487215 HSD17B11Q8NBQ5 300 aa12.78□□□□□ -0.36
SMPDL3A-202ENST00000487215 RAB24Q969Q5 203 aa12.78□□□□□ -0.36
SMPDL3A-202ENST00000487215 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
SMPDL3A-202ENST00000487215 ALG5Q9Y673 324 aa12.78□□□□□ -0.36
SMPDL3A-202ENST00000487215 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 TCRAP04437 139 aa12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 ZNF80P51504 273 aaPredicted RBP12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 SUN5Q8TC36 379 aa12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 SGK494Q96LW2 274 aa12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
SMPDL3A-202ENST00000487215 CXorf1O96002 111 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 OXTP01178 125 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 LINC00694P0DN24 101 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 GCHFRP30047 84 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 TOR2AQ5JU69 321 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 TMEM75Q8N9X5 138 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 PTH2Q96A98 100 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 CHAC1Q9BUX1 264 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 ACTR3CQ9C0K3 210 aaPredicted RBP12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 MED28Q9H204 178 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 BATF3Q9NR55 127 aa12.76□□□□□ -0.37
SMPDL3A-202ENST00000487215 GAGE12JA6NER3 117 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 RBFOX3A6NFN3 312 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 ATP6V0CP27449 155 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 GAGE1Q13065 139 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 GAGE4Q13068 117 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 GAGE5Q13069 117 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 GAGE13Q4V321 117 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 SMUG1Q53HV7 270 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 SAPCD1Q5SSQ6 148 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 SH3BGRL3Q9H299 93 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 TNFSF18Q9UNG2 199 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 PSG8Q9UQ74 426 aa12.75□□□□□ -0.37
SMPDL3A-202ENST00000487215 GGTLC3B5MD39 225 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 PTTG1O95997 202 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 GCGP01275 180 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 SUMO1P63165 101 aaKnown RBP12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 FLI1Q01543 452 aaPredicted RBP12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 CYB561D1Q8N8Q1 229 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 CIRBP-AS1Q8TBR5 109 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 EPDR1Q9UM22 224 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 PLA2G2DQ9UNK4 145 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 COX11Q9Y6N1 276 aa12.74□□□□□ -0.37
SMPDL3A-202ENST00000487215 INO80EQ8NBZ0 244 aaPredicted RBP12.73□□□□□ -0.37
SMPDL3A-202ENST00000487215 PARLQ9H300 379 aa12.73□□□□□ -0.37
SMPDL3A-202ENST00000487215 RNF222A6NCQ9 220 aa12.72□□□□□ -0.37
SMPDL3A-202ENST00000487215 PRNTQ86SH4 94 aa12.72□□□□□ -0.37
SMPDL3A-202ENST00000487215 Q8N976 141 aa12.72□□□□□ -0.37
SMPDL3A-202ENST00000487215 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
SMPDL3A-202ENST00000487215 Q9UF83 564 aa12.72□□□□□ -0.37
SMPDL3A-202ENST00000487215 BORCS7-ASMTA0A0B4J1R7 106 aa12.71□□□□□ -0.37
SMPDL3A-202ENST00000487215 A0A1W2PRE2 83 aa12.71□□□□□ -0.37
SMPDL3A-202ENST00000487215 ZFP2Q6ZN57 461 aa12.71□□□□□ -0.37
SMPDL3A-202ENST00000487215 RMI2Q96E14 147 aa12.71□□□□□ -0.37
SMPDL3A-202ENST00000487215 A0A087WWC5 75 aa12.7□□□□□ -0.38
SMPDL3A-202ENST00000487215 IGLV2-11P01706 119 aa12.7□□□□□ -0.38
SMPDL3A-202ENST00000487215 GIPP09681 153 aaPredicted RBP12.7□□□□□ -0.38
SMPDL3A-202ENST00000487215 IGKV2D-24A0A075B6R9 120 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 A8MWV9 139 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 OR2T35Q8NGX2 323 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 LINC00479Q96M42 142 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 SAMD10Q9BYL1 202 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 NKX6-2Q9C056 277 aaPredicted RBP12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 PKHD1L1Q86WI1 4243 aa12.69□□□□□ -0.38
SMPDL3A-202ENST00000487215 IFNA7P01567 189 aa12.68□□□□□ -0.38
SMPDL3A-202ENST00000487215 IGLV2-8P01709 118 aa12.68□□□□□ -0.38
SMPDL3A-202ENST00000487215 S100A4P26447 101 aaKnown RBP12.68□□□□□ -0.38
SMPDL3A-202ENST00000487215 NIT1Q86X76 327 aa12.68□□□□□ -0.38
SMPDL3A-202ENST00000487215 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
SMPDL3A-202ENST00000487215 FABP5P3A8MUU1 101 aa12.67□□□□□ -0.38
SMPDL3A-202ENST00000487215 LGALSLQ3ZCW2 172 aaPredicted RBP12.67□□□□□ -0.38
SMPDL3A-202ENST00000487215 UFSP1Q6NVU6 142 aa12.67□□□□□ -0.38
SMPDL3A-202ENST00000487215 JPT2Q9H910 190 aa12.67□□□□□ -0.38
SMPDL3A-202ENST00000487215 KLK12Q9UKR0 248 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms