RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 TTC32Q5I0X7 151 aa12.66□□□□□ -0.38
COL1A1-206ENST00000485870 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
COL1A1-206ENST00000485870 EIF5AL1Q6IS14 154 aaKnown RBP12.66□□□□□ -0.38
COL1A1-206ENST00000485870 PKHD1P08F94 4074 aa12.66□□□□□ -0.38
COL1A1-206ENST00000485870 IGHV3-73A0A0B4J1V6 119 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 LOC100131303A0A0U1RQF7 123 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 RS1O15537 224 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 NXPH4O95158 308 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 GATA1P15976 413 aaPredicted RBP12.65□□□□□ -0.38
COL1A1-206ENST00000485870 CFAP126Q5VTH2 177 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 LYPD5Q6UWN5 251 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 COX8CQ7Z4L0 72 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 AKAP14Q86UN6 197 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 NHLRC2Q8NBF2 726 aa12.65□□□□□ -0.38
COL1A1-206ENST00000485870 CCL20P78556 96 aa12.64□□□□□ -0.39
COL1A1-206ENST00000485870 PTH2Q96A98 100 aa12.64□□□□□ -0.39
COL1A1-206ENST00000485870 GNG13Q9P2W3 67 aa12.64□□□□□ -0.39
COL1A1-206ENST00000485870 GRIFINA4D1Z8 144 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 KRBOX1C9JBD0 128 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 H3BVH4 76 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 SIVA1O15304 175 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 RAB5CP51148 216 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 SLC51BQ86UW2 128 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 TXNDC17Q9BRA2 123 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 PKD1P98161 4303 aa12.63□□□□□ -0.39
COL1A1-206ENST00000485870 TMSB15BA0A087X1C1 80 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 A0A1W2PPQ1 181 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 S100A9P06702 114 aaKnown RBP12.62□□□□□ -0.39
COL1A1-206ENST00000485870 SULT1A2P50226 295 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 TNP2Q05952 138 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 ZNF674Q2M3X9 581 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 IL36BQ9NZH7 164 aa12.62□□□□□ -0.39
COL1A1-206ENST00000485870 TRAV1-1A0A0B4J248 108 aa12.61□□□□□ -0.39
COL1A1-206ENST00000485870 CIDEAO60543 219 aa12.61□□□□□ -0.39
COL1A1-206ENST00000485870 SLC25A29Q8N8R3 303 aa12.61□□□□□ -0.39
COL1A1-206ENST00000485870 TEX46H3BTG2 121 aa12.6□□□□□ -0.39
COL1A1-206ENST00000485870 ARMS2P0C7Q2 107 aa12.6□□□□□ -0.39
COL1A1-206ENST00000485870 LINC01559Q495D7 138 aa12.6□□□□□ -0.39
COL1A1-206ENST00000485870 BAGE2Q86Y30 109 aa12.6□□□□□ -0.39
COL1A1-206ENST00000485870 PRADC1Q9BSG0 188 aa12.6□□□□□ -0.39
COL1A1-206ENST00000485870 DNAH11Q96DT5 4516 aa12.6□□□□□ -0.39
COL1A1-206ENST00000485870 RHOHQ15669 191 aa12.59□□□□□ -0.39
COL1A1-206ENST00000485870 DNLZQ5SXM8 178 aa12.59□□□□□ -0.39
COL1A1-206ENST00000485870 C9orf62Q8N4C0 152 aa12.59□□□□□ -0.39
COL1A1-206ENST00000485870 PARLQ9H300 379 aa12.59□□□□□ -0.39
COL1A1-206ENST00000485870 JPT2Q9H910 190 aa12.59□□□□□ -0.39
COL1A1-206ENST00000485870 DYNC1H1Q14204 4646 aaKnown RBP12.58□□□□□ -0.39
COL1A1-206ENST00000485870 TRBV6-4A0A1B0GX49 114 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 A8MWV9 139 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 PIK3CD-AS1Q5SR53 167 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 DMRTA1Q5VZB9 504 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 SH2D6Q7Z4S9 175 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 ZNF575Q86XF7 245 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 SYT8Q8NBV8 401 aa12.58□□□□□ -0.4
COL1A1-206ENST00000485870 KIAA1109Q2LD37 5005 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 HERC2O95714 4834 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 MGST1P10620 155 aaKnown RBP12.57□□□□□ -0.4
COL1A1-206ENST00000485870 RPL35P42766 123 aaKnown RBP12.57□□□□□ -0.4
COL1A1-206ENST00000485870 LINC00315P59091 139 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 PRR27Q6MZM9 219 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 Q6ZSN1 163 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 DERL1Q9BUN8 251 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 MLST8Q9BVC4 326 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 PHLDA3Q9Y5J5 127 aa12.57□□□□□ -0.4
COL1A1-206ENST00000485870 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
COL1A1-206ENST00000485870 ZFP2Q6ZN57 461 aa12.56□□□□□ -0.4
COL1A1-206ENST00000485870 C11orf52Q96A22 123 aa12.56□□□□□ -0.4
COL1A1-206ENST00000485870 SAMD10Q9BYL1 202 aa12.56□□□□□ -0.4
COL1A1-206ENST00000485870 M0R381 172 aa12.55□□□□□ -0.4
COL1A1-206ENST00000485870 IFNA1P01562 189 aa12.55□□□□□ -0.4
COL1A1-206ENST00000485870 SCRT2Q9NQ03 307 aa12.55□□□□□ -0.4
COL1A1-206ENST00000485870 LY96Q9Y6Y9 160 aa12.55□□□□□ -0.4
COL1A1-206ENST00000485870 UFSP1Q6NVU6 142 aa12.54□□□□□ -0.4
COL1A1-206ENST00000485870 BTF3P20290 206 aaKnown RBP12.53□□□□□ -0.4
COL1A1-206ENST00000485870 MEF2BQ02080 365 aaPredicted RBP12.53□□□□□ -0.4
COL1A1-206ENST00000485870 CENPWQ5EE01 88 aa12.53□□□□□ -0.4
COL1A1-206ENST00000485870 FAM74A4Q5TZK3 123 aa12.53□□□□□ -0.4
COL1A1-206ENST00000485870 ZFP82Q8N141 532 aa12.53□□□□□ -0.4
COL1A1-206ENST00000485870 TRAV9-2A0A087WT02 112 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 A0A087WWL8 130 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 A0A1B0GVG6 124 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 GAGE12JA6NER3 117 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 RHODO00212 210 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 BCL2P10415 239 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 TIRAPP58753 221 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 GAGE1Q13065 139 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 GAGE4Q13068 117 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 GAGE5Q13069 117 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 GAGE13Q4V321 117 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 C14orf178Q8N769 122 aaPredicted RBP12.52□□□□□ -0.41
COL1A1-206ENST00000485870 SFRP2Q96HF1 295 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 TNFRSF18Q9Y5U5 241 aa12.52□□□□□ -0.41
COL1A1-206ENST00000485870 RAB19A4D1S5 217 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 PDE6DO43924 150 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 DNAH10OSP0CZ25 163 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 EVI2AP22794 236 aa12.51□□□□□ -0.41
COL1A1-206ENST00000485870 ALKAL2Q6UX46 152 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms