RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SUMO1P63165 101 aaKnown RBP12.82□□□□□ -0.36
COL27A1-205ENST00000485397 FLI1Q01543 452 aaPredicted RBP12.82□□□□□ -0.36
COL27A1-205ENST00000485397 SMUG1Q53HV7 270 aa12.82□□□□□ -0.36
COL27A1-205ENST00000485397 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
COL27A1-205ENST00000485397 GTSF1LQ9H1H1 148 aa12.82□□□□□ -0.36
COL27A1-205ENST00000485397 FAM30AQ9NZY2 134 aa12.82□□□□□ -0.36
COL27A1-205ENST00000485397 GGTLC3B5MD39 225 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 K7EQM0 130 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 ATP6V0CP27449 155 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 Q6ZSN1 163 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 Q8N3U1 123 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 PTH2Q96A98 100 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 EPDR1Q9UM22 224 aa12.81□□□□□ -0.36
COL27A1-205ENST00000485397 MGST1P10620 155 aaKnown RBP12.8□□□□□ -0.36
COL27A1-205ENST00000485397 WFDC2Q14508 124 aa12.8□□□□□ -0.36
COL27A1-205ENST00000485397 PSMG3Q9BT73 122 aaPredicted RBP12.8□□□□□ -0.36
COL27A1-205ENST00000485397 BOLA1Q9Y3E2 137 aa12.8□□□□□ -0.36
COL27A1-205ENST00000485397 ZFP69Q49AA0 526 aa12.79□□□□□ -0.36
COL27A1-205ENST00000485397 CYB561D1Q8N8Q1 229 aa12.79□□□□□ -0.36
COL27A1-205ENST00000485397 ALG5Q9Y673 324 aa12.79□□□□□ -0.36
COL27A1-205ENST00000485397 MYCBP2O75592 4640 aa12.79□□□□□ -0.36
COL27A1-205ENST00000485397 IGKV3D-20A0A0C4DH25 116 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 GAGE12JA6NER3 117 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 GAGE1Q13065 139 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 GAGE4Q13068 117 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 GAGE5Q13069 117 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 GAGE13Q4V321 117 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 SH3BGRL3Q9H299 93 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 PARLQ9H300 379 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 TMEM167BQ9NRX6 74 aa12.78□□□□□ -0.36
COL27A1-205ENST00000485397 TRAV34A0A0B4J273 112 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 CXorf1O96002 111 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 MBP02144 154 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 LAGE3Q14657 143 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 AQP10Q96PS8 301 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 TM2D2Q9BX73 214 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 ACTR3CQ9C0K3 210 aaPredicted RBP12.77□□□□□ -0.37
COL27A1-205ENST00000485397 Q9UF83 564 aa12.77□□□□□ -0.37
COL27A1-205ENST00000485397 SERF2P84101 59 aa12.76□□□□□ -0.37
COL27A1-205ENST00000485397 LGALSLQ3ZCW2 172 aaPredicted RBP12.76□□□□□ -0.37
COL27A1-205ENST00000485397 SAPCD1Q5SSQ6 148 aa12.76□□□□□ -0.37
COL27A1-205ENST00000485397 OR2T35Q8NGX2 323 aa12.76□□□□□ -0.37
COL27A1-205ENST00000485397 JPT2Q9H910 190 aa12.76□□□□□ -0.37
COL27A1-205ENST00000485397 LINC00694P0DN24 101 aa12.75□□□□□ -0.37
COL27A1-205ENST00000485397 S100A4P26447 101 aaKnown RBP12.75□□□□□ -0.37
COL27A1-205ENST00000485397 Q5BKY6 102 aa12.75□□□□□ -0.37
COL27A1-205ENST00000485397 ZFP2Q6ZN57 461 aa12.75□□□□□ -0.37
COL27A1-205ENST00000485397 TNFSF18Q9UNG2 199 aa12.75□□□□□ -0.37
COL27A1-205ENST00000485397 A8MWV9 139 aa12.74□□□□□ -0.37
COL27A1-205ENST00000485397 LECT2O14960 151 aa12.74□□□□□ -0.37
COL27A1-205ENST00000485397 DAZ4Q86SG3 579 aaKnown RBP12.74□□□□□ -0.37
COL27A1-205ENST00000485397 SAMD10Q9BYL1 202 aa12.74□□□□□ -0.37
COL27A1-205ENST00000485397 DAZ3Q9NR90 486 aaKnown RBP12.74□□□□□ -0.37
COL27A1-205ENST00000485397 ARL2-SNX15V9GYD0 113 aa12.74□□□□□ -0.37
COL27A1-205ENST00000485397 A0A1W2PRE2 83 aa12.73□□□□□ -0.37
COL27A1-205ENST00000485397 ASIPP42127 132 aa12.73□□□□□ -0.37
COL27A1-205ENST00000485397 UFSP1Q6NVU6 142 aa12.73□□□□□ -0.37
COL27A1-205ENST00000485397 C14orf178Q8N769 122 aaPredicted RBP12.73□□□□□ -0.37
COL27A1-205ENST00000485397 SRRM2Q9UQ35 2752 aaKnown RBP12.72□□□□□ -0.37
COL27A1-205ENST00000485397 FABP5P3A8MUU1 101 aa12.72□□□□□ -0.37
COL27A1-205ENST00000485397 C1QBP02746 253 aa12.72□□□□□ -0.37
COL27A1-205ENST00000485397 ZNF726P1Q15940 193 aa12.72□□□□□ -0.37
COL27A1-205ENST00000485397 TRAV8-3A0A0A6YYJ7 113 aa12.71□□□□□ -0.37
COL27A1-205ENST00000485397 IFNA7P01567 189 aa12.71□□□□□ -0.37
COL27A1-205ENST00000485397 UBE2G2P60604 165 aa12.71□□□□□ -0.37
COL27A1-205ENST00000485397 PIK3CD-AS1Q5SR53 167 aa12.71□□□□□ -0.37
COL27A1-205ENST00000485397 DMRTA1Q5VZB9 504 aa12.71□□□□□ -0.37
COL27A1-205ENST00000485397 RPL7L1Q6DKI1 246 aaKnown RBP12.71□□□□□ -0.37
COL27A1-205ENST00000485397 MED28Q9H204 178 aa12.71□□□□□ -0.37
COL27A1-205ENST00000485397 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.7□□□□□ -0.38
COL27A1-205ENST00000485397 B4DEV8 164 aa12.7□□□□□ -0.38
COL27A1-205ENST00000485397 H3BVH4 76 aa12.7□□□□□ -0.38
COL27A1-205ENST00000485397 CRIP1P50238 77 aa12.7□□□□□ -0.38
COL27A1-205ENST00000485397 BAALCQ8WXS3 180 aa12.7□□□□□ -0.38
COL27A1-205ENST00000485397 IL36BQ9NZH7 164 aa12.7□□□□□ -0.38
COL27A1-205ENST00000485397 PEX7O00628 323 aa12.69□□□□□ -0.38
COL27A1-205ENST00000485397 TOR2AQ5JU69 321 aa12.69□□□□□ -0.38
COL27A1-205ENST00000485397 Q6ZSA8 131 aa12.69□□□□□ -0.38
COL27A1-205ENST00000485397 Q86TA4 180 aa12.69□□□□□ -0.38
COL27A1-205ENST00000485397 A0A087WWC5 75 aa12.68□□□□□ -0.38
COL27A1-205ENST00000485397 CTXND1A0A1B0GTU2 59 aa12.68□□□□□ -0.38
COL27A1-205ENST00000485397 GRIFINA4D1Z8 144 aa12.68□□□□□ -0.38
COL27A1-205ENST00000485397 M0R036 132 aa12.68□□□□□ -0.38
COL27A1-205ENST00000485397 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
COL27A1-205ENST00000485397 FGF8P55075 233 aaPredicted RBP12.68□□□□□ -0.38
COL27A1-205ENST00000485397 DNAJC30Q96LL9 226 aa12.68□□□□□ -0.38
COL27A1-205ENST00000485397 RNF222A6NCQ9 220 aa12.67□□□□□ -0.38
COL27A1-205ENST00000485397 KRBOX1C9JBD0 128 aa12.67□□□□□ -0.38
COL27A1-205ENST00000485397 J3QL48 77 aa12.67□□□□□ -0.38
COL27A1-205ENST00000485397 LINC01620Q4KN68 170 aa12.67□□□□□ -0.38
COL27A1-205ENST00000485397 ZC2HC1AQ96GY0 325 aa12.67□□□□□ -0.38
COL27A1-205ENST00000485397 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 SH2D1AO60880 128 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 DNLZQ5SXM8 178 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 FAM74A4Q5TZK3 123 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 NIT1Q86X76 327 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 LINC00528Q8N1L1 170 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 SYT8Q8NBV8 401 aa12.66□□□□□ -0.38
COL27A1-205ENST00000485397 INO80EQ8NBZ0 244 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms