RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 IFNA1P01562 189 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 FAM3BP58499 235 aaPredicted RBP8.5□□□□□ -1.05
SHANK1-208ENST00000483981 ESRGQ1W209 222 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 ZNF506Q5JVG8 444 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 PIK3CD-AS1Q5SR53 167 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 CFAP126Q5VTH2 177 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 ZNRF2Q8NHG8 242 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 EPPK1P58107 5090 aaKnown RBP8.5□□□□□ -1.05
SHANK1-208ENST00000483981 DNAH10Q8IVF4 4471 aa8.5□□□□□ -1.05
SHANK1-208ENST00000483981 GRIFINA4D1Z8 144 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 C9JCJ5 164 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 PAX4O43316 350 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 TAGLN2P37802 199 aaKnown RBP8.49□□□□□ -1.05
SHANK1-208ENST00000483981 ASIPP42127 132 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 SLAQ13239 276 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 CENPWQ5EE01 88 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 Q6ZR54 194 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 OR4C5Q8NGB2 326 aa8.49□□□□□ -1.05
SHANK1-208ENST00000483981 DNAH2Q9P225 4427 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 TRGV4A0A0C4DH28 118 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 H3BVH4 76 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 ARMS2P0C7Q2 107 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 GATA1P15976 413 aaPredicted RBP8.48□□□□□ -1.05
SHANK1-208ENST00000483981 CCL18P55774 89 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 DMRTA1Q5VZB9 504 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 UFSP1Q6NVU6 142 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 UBE2DNLQ8IWF7 75 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 SMIM12Q96EX1 92 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 MED9Q9NWA0 146 aa8.48□□□□□ -1.05
SHANK1-208ENST00000483981 TMSB15BA0A087X1C1 80 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 C19orf71A6NCJ1 209 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 RBFOX3A6NFN3 312 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 CIDEAO60543 219 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 CXCL1P09341 107 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 S100A4P26447 101 aaKnown RBP8.47□□□□□ -1.05
SHANK1-208ENST00000483981 RPL19P84098 196 aaKnown RBP8.47□□□□□ -1.05
SHANK1-208ENST00000483981 TEX261Q6UWH6 196 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 UPK3BQ9BT76 320 aa8.47□□□□□ -1.05
SHANK1-208ENST00000483981 SSBP4Q9BWG4 385 aaPredicted RBP8.47□□□□□ -1.05
SHANK1-208ENST00000483981 K7EQD1 137 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 MED14OSP0DP75 135 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 GNG4P50150 75 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 Q6ZSN1 163 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 SAMD10Q9BYL1 202 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 PARLQ9H300 379 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 JPT2Q9H910 190 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 ICOSQ9Y6W8 199 aa8.46□□□□□ -1.06
SHANK1-208ENST00000483981 IGLV2-18A0A075B6J9 118 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 LOC100131303A0A0U1RQF7 123 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 TRBV6-4A0A1B0GX49 114 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 TMEM250H0YL14 139 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 M0R2N4 97 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 NDUFS6O75380 124 aaKnown RBP8.45□□□□□ -1.06
SHANK1-208ENST00000483981 NXPH4O95158 308 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 GYPEP15421 78 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 MRPL23Q16540 153 aaKnown RBP8.45□□□□□ -1.06
SHANK1-208ENST00000483981 PRR27Q6MZM9 219 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 LYPD5Q6UWN5 251 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 ZFP2Q6ZN57 461 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 SLC25A29Q8N8R3 303 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 MRPS16Q9Y3D3 137 aaKnown RBP8.45□□□□□ -1.06
SHANK1-208ENST00000483981 FRAS1Q86XX4 4008 aa8.45□□□□□ -1.06
SHANK1-208ENST00000483981 A8MWV9 139 aa8.44□□□□□ -1.06
SHANK1-208ENST00000483981 SNAI2O43623 268 aa8.44□□□□□ -1.06
SHANK1-208ENST00000483981 OCC1Q8TAD7 63 aa8.44□□□□□ -1.06
SHANK1-208ENST00000483981 SFRP2Q96HF1 295 aa8.44□□□□□ -1.06
SHANK1-208ENST00000483981 FAM210AQ96ND0 272 aa8.44□□□□□ -1.06
SHANK1-208ENST00000483981 IGHV3-73A0A0B4J1V6 119 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 K7EN84 100 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 CRYGDP07320 174 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 OR5AL1P0C617 328 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 MGST1P10620 155 aaKnown RBP8.43□□□□□ -1.06
SHANK1-208ENST00000483981 TOR2AQ5JU69 321 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 NEGR1Q7Z3B1 354 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 Q9H8V8 135 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 PHLDA3Q9Y5J5 127 aa8.43□□□□□ -1.06
SHANK1-208ENST00000483981 FAT2Q9NYQ8 4349 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 NBDYA0A0U1RRE5 68 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 RTL8CO15255 209 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 IGLC6P0CF74 106 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 ZFP82Q8N141 532 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 SYT8Q8NBV8 401 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 OR10AG1Q8NH19 301 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 PCNPQ8WW12 178 aaKnown RBP8.42□□□□□ -1.06
SHANK1-208ENST00000483981 Q9UF83 564 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 DNAH17Q9UFH2 4485 aa8.42□□□□□ -1.06
SHANK1-208ENST00000483981 M0R381 172 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 SRP19P09132 144 aaKnown RBP8.41□□□□□ -1.06
SHANK1-208ENST00000483981 LINC00694P0DN24 101 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 GZMBP10144 247 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 SRIP30626 198 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 RHOHQ15669 191 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 NUDT10Q8NFP7 164 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 NUDT11Q96G61 164 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 KRTAP1-5Q9BYS1 174 aa8.41□□□□□ -1.06
SHANK1-208ENST00000483981 C9JQL5 133 aa8.4□□□□□ -1.06
SHANK1-208ENST00000483981 TIRAPP58753 221 aa8.4□□□□□ -1.06
SHANK1-208ENST00000483981 C14orf178Q8N769 122 aaPredicted RBP8.4□□□□□ -1.06
SHANK1-208ENST00000483981 OR2D3Q8NGH3 330 aa8.4□□□□□ -1.06
SHANK1-208ENST00000483981 EIF5A2Q9GZV4 153 aaKnown RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms