RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 COL6A3P12111 3177 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 IGKV3D-20A0A0C4DH25 116 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 SPRY2O43597 315 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 CTSGP08311 255 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 LINC01548A6NM66 108 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 SCGB1A1P11684 91 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 WFDC2Q14508 124 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 SPINK13Q1W4C9 94 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 CEND1Q8N111 149 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 NPBQ8NG41 125 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 SIRPDQ9H106 197 aa8.81□□□□□ -1
SMPD4-218ENST00000482171 TRGV2A0A075B6R0 118 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 TRAV8-4A0A0B4J246 113 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 FXYD2P54710 66 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 LINC00477Q96M19 166 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 A0A087WWL8 130 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 NPC2P61916 151 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 SPATA12Q7Z6I5 190 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 LINC00574Q9H8X3 128 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 TMEM14CQ9P0S9 112 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 ZNF292O60281 2723 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 IGLV2-8P01709 118 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 SUMO2P61956 95 aaKnown RBP8.8□□□□□ -1
SMPD4-218ENST00000482171 TRBV25-1A0A075B6N4 114 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 TRAV12-2A0A075B6T6 113 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 LINC00310P59036 64 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 C12orf74Q32Q52 190 aa8.8□□□□□ -1
SMPD4-218ENST00000482171 SIVA1O15304 175 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 GP9P14770 177 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 HTN3P15516 51 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 RPL35AP18077 110 aaKnown RBP8.79□□□□□ -1
SMPD4-218ENST00000482171 ADAMTS20P59510 1910 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 GATA1P15976 413 aaPredicted RBP8.79□□□□□ -1
SMPD4-218ENST00000482171 DEFB113Q30KQ7 82 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 HIST2H2BCQ6DN03 193 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 INS-IGF2F8WCM5 200 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 TCTEX1D4Q5JR98 221 aa8.79□□□□□ -1
SMPD4-218ENST00000482171 UBE2L6O14933 153 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 NDUFA4O00483 81 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 DEFB1P60022 68 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 FANCD2OSQ96PS1 177 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 KLK9Q9UKQ9 250 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 KNCNA6PVL3 124 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 LINC00322Q6ZN03 302 aaPredicted RBP8.78□□□□□ -1
SMPD4-218ENST00000482171 C5orf56Q8N8D9 126 aa8.78□□□□□ -1
SMPD4-218ENST00000482171 ANKRD17O75179 2603 aaKnown RBP8.78□□□□□ -1
SMPD4-218ENST00000482171 IGKV1D-37A0A075B6S9 117 aa8.77□□□□□ -1
SMPD4-218ENST00000482171 G3V4G9 280 aa8.77□□□□□ -1
SMPD4-218ENST00000482171 IGHV3-53P01767 116 aa8.77□□□□□ -1
SMPD4-218ENST00000482171 Q8N8P6 123 aa8.77□□□□□ -1
SMPD4-218ENST00000482171 MSRB1Q9NZV6 116 aa8.77□□□□□ -1
SMPD4-218ENST00000482171 ANXA2RQ3ZCQ2 193 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 C2orf66Q6UXQ4 117 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 PRADC1Q9BSG0 188 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 DNAL4O96015 105 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 RNASE1P07998 156 aaKnown RBP8.77□□□□□ -1.01
SMPD4-218ENST00000482171 EGR2P11161 476 aaPredicted RBP8.77□□□□□ -1.01
SMPD4-218ENST00000482171 LY6G5BQ8NDX9 201 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 DPH3P1Q9H4G8 78 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 MYMXA0A1B0GTQ4 84 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 C19orf54Q5BKX5 351 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 AGPAT4-IT1Q9H0P7 198 aa8.77□□□□□ -1.01
SMPD4-218ENST00000482171 PPDPFLQ8WWR9 84 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 XCL2Q9UBD3 114 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 VPREB3Q9UKI3 123 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 J3QLI3 93 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 LOXL1Q08397 574 aaPredicted RBP8.76□□□□□ -1.01
SMPD4-218ENST00000482171 SPEGQ15772 3267 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 IGLL5B9A064 214 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 HLA-DRB4P13762 266 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 C2orf82Q6UX34 121 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 BOD1L2Q8IYS8 172 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 AJUBAQ96IF1 538 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 HLA-DRB4X5D2U9 266 aa8.76□□□□□ -1.01
SMPD4-218ENST00000482171 F8VRH5 84 aa8.75□□□□□ -1.01
SMPD4-218ENST00000482171 FOXE3Q13461 319 aa8.75□□□□□ -1.01
SMPD4-218ENST00000482171 A0A1W2PPR1 153 aa8.75□□□□□ -1.01
SMPD4-218ENST00000482171 C11orf71Q6IPW1 123 aa8.75□□□□□ -1.01
SMPD4-218ENST00000482171 NEGR1Q7Z3B1 354 aa8.75□□□□□ -1.01
SMPD4-218ENST00000482171 TRBV12-3P01733 135 aa8.75□□□□□ -1.01
SMPD4-218ENST00000482171 IGHV7-4-1A0A0J9YVY3 117 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 CFHR4Q92496 578 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 A0A1B0GXF2 115 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 PRAC2D3DTV9 90 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 CRYGCP07315 174 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 FOXI2Q6ZQN5 318 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 TRGV1A0A0A0MS02 117 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 BUB3O43684 328 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 CD28P10747 220 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 ZNF876PQ49A33 203 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 KLF12Q9Y4X4 402 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 OR13C6PQ8NH95 151 aa8.74□□□□□ -1.01
SMPD4-218ENST00000482171 ODF3BA8MYP8 253 aa8.73□□□□□ -1.01
SMPD4-218ENST00000482171 B5MCH6 92 aa8.73□□□□□ -1.01
SMPD4-218ENST00000482171 LINC01619G3V211 115 aa8.73□□□□□ -1.01
SMPD4-218ENST00000482171 M0R2P5 195 aa8.73□□□□□ -1.01
SMPD4-218ENST00000482171 HOXD3P31249 432 aaPredicted RBP8.73□□□□□ -1.01
SMPD4-218ENST00000482171 TP53TG1Q9Y2A0 90 aa8.73□□□□□ -1.01
SMPD4-218ENST00000482171 MAP1AP78559 2803 aaPredicted RBP8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms