RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 TRAV21A0A0B4J279 112 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 C16orf90A8MZG2 172 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 M0R2P5 195 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 SIVA1O15304 175 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 NXPH4O95158 308 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 IGHV3-53P01767 116 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 TCRAP04437 139 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 NEGR1Q7Z3B1 354 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 C5orf17Q8NAS9 161 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 ZNF479Q96JC4 524 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 TREM1Q9NP99 234 aa6.63□□□□□ -1.35
TMEM39A-207ENST00000482162 TRAV4A0A0B4J268 109 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 TMEM250H0YL14 139 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 K7EP13 123 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 K7EQD1 137 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 K7EQM0 130 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 SFTA3P0C7M3 94 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 ZNF80P51504 273 aaPredicted RBP6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 TIRAPP58753 221 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 SUMO1P63165 101 aaKnown RBP6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 GNG5P63218 68 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 HIST1H2BAQ96A08 127 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 PTH2Q96A98 100 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 C11orf21Q9P2W6 132 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 EPDR1Q9UM22 224 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 HSPG2P98160 4391 aa6.62□□□□□ -1.35
TMEM39A-207ENST00000482162 TRGV4A0A0C4DH28 118 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 FBLL1A6NHQ2 334 aaKnown RBP6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 GGTLC3B5MD39 225 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 ORM1P02763 201 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 TYMSP04818 313 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 LINC00315P59091 139 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 KRTAP10-2P60368 255 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 LINC01559Q495D7 138 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 SPATA12Q7Z6I5 190 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 KCNS1Q96KK3 526 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 SDF2L1Q9HCN8 221 aa6.61□□□□□ -1.35
TMEM39A-207ENST00000482162 PEX7O00628 323 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 CIDEAO60543 219 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 S100A9P06702 114 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 DNAH10OSP0CZ25 163 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 GATA1P15976 413 aaPredicted RBP6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 CYB561D1Q8N8Q1 229 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 C11orf52Q96A22 123 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 C9orf85Q96MD7 179 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 PSG8Q9UQ74 426 aa6.6□□□□□ -1.35
TMEM39A-207ENST00000482162 C9JCJ5 164 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 PFN1P07737 140 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 GYPEP15421 78 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 AKR1C3P42330 323 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 UBE2G1P62253 170 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 FLI1Q01543 452 aaPredicted RBP6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 FAM74A3Q4VXF1 159 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 C4orf48Q5BLP8 95 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 PIK3CD-AS1Q5SR53 167 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 SAPCD1Q5SSQ6 148 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 COX8CQ7Z4L0 72 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 SH2D6Q7Z4S9 175 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 TMEM75Q8N9X5 138 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 OR4C5Q8NGB2 326 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 SGK494Q96LW2 274 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 NAGKQ9UJ70 344 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 RPH3ALQ9UNE2 315 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 TNFRSF18Q9Y5U5 241 aa6.59□□□□□ -1.35
TMEM39A-207ENST00000482162 SCO2A0A1W2PP80 73 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 RS1O15537 224 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 GCGP01275 180 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 SRP19P09132 144 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 RNASE3P12724 160 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 SRIP30626 198 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 CEBPGP53567 150 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 ZNF876PQ49A33 203 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 CFAP126Q5VTH2 177 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 NFE4Q86UQ8 179 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 FMC1Q96HJ9 113 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 NDFIP1Q9BT67 221 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 PGPEP1Q9NXJ5 209 aa6.58□□□□□ -1.36
TMEM39A-207ENST00000482162 TRAV9-2A0A087WT02 112 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 IGKV3D-20A0A0C4DH25 116 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 TRBV6-4A0A1B0GX49 114 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 KRBOX1C9JBD0 128 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 SRSF3P84103 164 aaKnown RBP6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 SMUG1Q53HV7 270 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 WFDC10BQ8IUB3 73 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 SLC25A29Q8N8R3 303 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 LINC00479Q96M42 142 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 SMIM7Q9BQ49 75 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 LY96Q9Y6Y9 160 aa6.57□□□□□ -1.36
TMEM39A-207ENST00000482162 TRBV6-1A0A0K0K1D8 114 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 LOC100131303A0A0U1RQF7 123 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 TMEM218A2RU14 115 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 PGPEP1LA6NFU8 196 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 ZNF727A8MUV8 499 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 F8W036 122 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 RPL35P42766 123 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 GNG4P50150 75 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 CRIP1P50238 77 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 DNLZQ5SXM8 178 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 CDPF1Q6NVV7 123 aa6.56□□□□□ -1.36
TMEM39A-207ENST00000482162 PRNTQ86SH4 94 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms