RNA–Protein interactions for RNA: ENST00000480943.5

VPS50-215, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 801 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-215ENST00000480943 GNG5P63218 68 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 ZNF266Q14584 549 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 FAM74A1Q5RGS3 127 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 IBA57Q5T440 356 aaKnown RBP4.22□□□□□ -1.73
VPS50-215ENST00000480943 PQLC2Q6ZP29 291 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 SSX7Q7RTT5 188 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 OR10G4Q8NGN3 311 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 OR10G9Q8NGN4 311 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 OR10G7Q8NGN6 311 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 CMTM2Q8TAZ6 248 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 VSIG2Q96IQ7 327 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 OTORQ9NRC9 128 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 NAGKQ9UJ70 344 aa4.22□□□□□ -1.73
VPS50-215ENST00000480943 A0A096LPF7 62 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 TRBV7-9A0A0J9YWB2 115 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 PGPA6NDG6 321 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 F6UZH7 168 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 ARL14EPLP0DKL9 152 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 ATP6V0CP27449 155 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 ESRGQ1W209 222 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 Q5BKY6 102 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 Q6AWC8 147 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 GOLT1AQ6ZVE7 132 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 C6orf223Q8N319 242 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 ST6GAL2Q96JF0 529 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 SGK494Q96LW2 274 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 C18orf15Q96N68 181 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 AQP10Q96PS8 301 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 SH3BGRL3Q9H299 93 aa4.21□□□□□ -1.74
VPS50-215ENST00000480943 RYR1P21817 5038 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 FXYD6-FXYD2A0A087WZ82 144 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 TRAV8-1A0A0A6YYK1 113 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 H3BNG1 76 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 GIPP09681 153 aaPredicted RBP4.2□□□□□ -1.74
VPS50-215ENST00000480943 SFTA3P0C7M3 94 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 STAG3L2P0CL84 134 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 STAG3L3P0CL85 134 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 TMEM183BQ1AE95 376 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 TTC32Q5I0X7 151 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 FAM159AQ6UWV7 190 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 IQCF2Q8IXL9 164 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 TMEM183AQ8IXX5 376 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 OR2G3Q8NGZ4 309 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 PSMG3Q9BT73 122 aaPredicted RBP4.2□□□□□ -1.74
VPS50-215ENST00000480943 Q9H8V8 135 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 MRPS16Q9Y3D3 137 aaKnown RBP4.2□□□□□ -1.74
VPS50-215ENST00000480943 LENEPQ9Y5L5 61 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 ICOSQ9Y6W8 199 aa4.2□□□□□ -1.74
VPS50-215ENST00000480943 TRGV4A0A0C4DH28 118 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 RNF222A6NCQ9 220 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 MBP02144 154 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 TYMSP04818 313 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 GCHFRP30047 84 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 SEC61BP60468 96 aaKnown RBP4.19□□□□□ -1.74
VPS50-215ENST00000480943 RPL7L1Q6DKI1 246 aaKnown RBP4.19□□□□□ -1.74
VPS50-215ENST00000480943 INO80EQ8NBZ0 244 aaPredicted RBP4.19□□□□□ -1.74
VPS50-215ENST00000480943 OR2T35Q8NGX2 323 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 TVP23CQ96ET8 276 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 SPXQ9BT56 116 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 NDFIP1Q9BT67 221 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 UPK3BQ9BT76 320 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 TREM1Q9NP99 234 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 PRO0255Q9UI72 69 aa4.19□□□□□ -1.74
VPS50-215ENST00000480943 BORCS7-ASMTA0A0B4J1R7 106 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 TRAV21A0A0B4J279 112 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 GGTLC3B5MD39 225 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 K7EQM0 130 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 GNRH2O43555 120 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 CXorf1O96002 111 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 TCRAP04437 139 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 CRYBA4P53673 196 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 SERF2P84101 59 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 RGS21Q2M5E4 152 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 TDRG1Q3Y452 100 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 ARL6IP6Q8N6S5 226 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 C5orf17Q8NAS9 161 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 ASB13Q8WXK3 278 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 ACTR3CQ9C0K3 210 aaPredicted RBP4.18□□□□□ -1.74
VPS50-215ENST00000480943 TMEM167BQ9NRX6 74 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 TNFSF18Q9UNG2 199 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
VPS50-215ENST00000480943 TRAV4A0A0B4J268 109 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 IGHV3-16A0A0C4DH30 117 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 SERTM2A0A1B0GWG4 89 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 C16orf90A8MZG2 172 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 G3V3Q6 166 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 SIVA1O15304 175 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 ARPC5O15511 151 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 NXPH4O95158 308 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 GCGP01275 180 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 SRIP30626 198 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 ZNF80P51504 273 aaPredicted RBP4.17□□□□□ -1.74
VPS50-215ENST00000480943 FGF8P55075 233 aaPredicted RBP4.17□□□□□ -1.74
VPS50-215ENST00000480943 UBE2G2P60604 165 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 FLI1Q01543 452 aaPredicted RBP4.17□□□□□ -1.74
VPS50-215ENST00000480943 SLAQ13239 276 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 ZNF726P1Q15940 193 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 MRPL23Q16540 153 aaKnown RBP4.17□□□□□ -1.74
VPS50-215ENST00000480943 ZFP69Q49AA0 526 aa4.17□□□□□ -1.74
VPS50-215ENST00000480943 CFAP161Q6P656 301 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms