RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 SERF2P84101 59 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 TDRG1Q3Y452 100 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 FAM74A4Q5TZK3 123 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 CST9LP1Q5W188 147 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 ARL6IP6Q8N6S5 226 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 ATP6V0E2Q8NHE4 81 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 PSMG3Q9BT73 122 aaPredicted RBP4.82□□□□□ -1.64
COL17A1-205ENST00000480127 EPDR1Q9UM22 224 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 FAT1Q14517 4588 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 MYCBP2O75592 4640 aa4.82□□□□□ -1.64
COL17A1-205ENST00000480127 TRAV34A0A0B4J273 112 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GAGE12JA6NER3 117 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 A6NHS1 94 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 B4DEV8 164 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 FAM229AH3BQW9 127 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 M0R036 132 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 STAG3L2P0CL84 134 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 STAG3L3P0CL85 134 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GATA1P15976 413 aaPredicted RBP4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GCSHP23434 173 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GAGE1Q13065 139 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GAGE4Q13068 117 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GAGE5Q13069 117 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 GAGE13Q4V321 117 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 TOR2AQ5JU69 321 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 ZNF506Q5JVG8 444 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 SLC25A29Q8N8R3 303 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 TMEM75Q8N9X5 138 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 OR11H4Q8NGC9 324 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 OR2T35Q8NGX2 323 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 TNFSF18Q9UNG2 199 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 PHLDA3Q9Y5J5 127 aa4.81□□□□□ -1.64
COL17A1-205ENST00000480127 TMSB15BA0A087X1C1 80 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 CTXND1A0A1B0GTU2 59 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 FABP5P3A8MUU1 101 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 A8MWV9 139 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 GGTLC3B5MD39 225 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 H3BVH4 76 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 PEX7O00628 323 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 SMR3BP02814 79 aaPredicted RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 GIPP09681 153 aaPredicted RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 SEC11BP0C7V7 166 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 TPT1P13693 172 aaKnown RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 AKR1C3P42330 323 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 FGF8P55075 233 aaPredicted RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 FAM162BQ5T6X4 162 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 CFAP126Q5VTH2 177 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 RPL7L1Q6DKI1 246 aaKnown RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 RMI2Q96E14 147 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 AQP10Q96PS8 301 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 NKX6-2Q9C056 277 aaPredicted RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 GTSF1LQ9H1H1 148 aa4.8□□□□□ -1.64
COL17A1-205ENST00000480127 FLG2Q5D862 2391 aaPredicted RBP4.8□□□□□ -1.64
COL17A1-205ENST00000480127 A0A087WWC5 75 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 A0A087WX48 190 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 TRAV8-3A0A0A6YYJ7 113 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 A0A1B0GV50 99 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 TRBV6-4A0A1B0GX49 114 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 A0A1W2PRE2 83 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 MAP1LC3B2A6NCE7 125 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 M0R381 172 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 RHODO00212 210 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 ARPC5O15511 151 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 RS1O15537 224 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 PFDN1O60925 122 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 LINC01556Q5JQF7 62 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 LELP1Q5T871 98 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 TVP23CQ96ET8 276 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 MAP1LC3BQ9GZQ8 125 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 ARL2-SNX15V9GYD0 113 aa4.79□□□□□ -1.64
COL17A1-205ENST00000480127 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 GRIFINA4D1Z8 144 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 PGPEP1LA6NFU8 196 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 TMEM262E9PQX1 116 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 LECT2O14960 151 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 ZNF80P51504 273 aaPredicted RBP4.78□□□□□ -1.64
COL17A1-205ENST00000480127 TIRAPP58753 221 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 SSTP61278 116 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 ZNF56Q15929 161 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 RGS21Q2M5E4 152 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 Q86TA4 180 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 NTN5Q8WTR8 489 aaPredicted RBP4.78□□□□□ -1.64
COL17A1-205ENST00000480127 HIST1H2BAQ96A08 127 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 FMC1Q96HJ9 113 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 LINC00479Q96M42 142 aa4.78□□□□□ -1.64
COL17A1-205ENST00000480127 UBR4Q5T4S7 5183 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.77□□□□□ -1.65
COL17A1-205ENST00000480127 IGKV2D-24A0A075B6R9 120 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 A0A087WWL8 130 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 RBFOX3A6NFN3 312 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 IBA57-AS1B1ANH7 110 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 F5H697 171 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 J3QL48 77 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 SH2D1AO60880 128 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 CRPP02741 224 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 HAMPP81172 84 aa4.77□□□□□ -1.65
COL17A1-205ENST00000480127 RPL36AP83881 106 aaKnown RBP4.77□□□□□ -1.65
COL17A1-205ENST00000480127 DMRTA1Q5VZB9 504 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms