RNA–Protein interactions for RNA: ENST00000478999.1

VPS45-208, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 468 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-208ENST00000478999 TPPP3Q9BW30 176 aa6.34□□□□□ -1.39
VPS45-208ENST00000478999 AGPAT4-IT1Q9H0P7 198 aa6.34□□□□□ -1.39
VPS45-208ENST00000478999 MAP1LC3AQ9H492 121 aa6.34□□□□□ -1.39
VPS45-208ENST00000478999 TMEM213A2RRL7 107 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 PRSS47A8MTI9 375 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 TSPOP30536 169 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 APRG1Q8IVJ8 170 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 AMN1Q8IY45 258 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 OR10J6PQ8NGY7 276 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 DAZ1Q9NQZ3 744 aaKnown RBP6.33□□□□□ -1.4
VPS45-208ENST00000478999 SIGLEC8Q9NYZ4 499 aa6.33□□□□□ -1.4
VPS45-208ENST00000478999 TMSB15BA0A087X1C1 80 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 TRAV21A0A0B4J279 112 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 IGHV3-35A0A0C4DH35 117 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 IGHV7-4-1A0A0J9YVY3 117 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 K7EMI3 77 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 SOCS3O14543 225 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 TCAPO15273 167 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 HLA-DMBP28068 263 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 ID1P41134 155 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 GAGE1Q13065 139 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 LGALS9BQ3B8N2 356 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 FAM106AQ4KMX7 169 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 LGALS9CQ6DKI2 356 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 GPHB5Q86YW7 130 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 ZNF738Q8NE65 137 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 KLHL30-AS1Q8NEE0 82 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 OR1N2Q8NGR9 330 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 MRAP2Q96G30 205 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 ODF3Q96PU9 254 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 UFC1Q9Y3C8 167 aa6.32□□□□□ -1.4
VPS45-208ENST00000478999 DNAH7Q8WXX0 4024 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 IGHV3OR16-8A0A075B7F1 116 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 ADARB2-AS1A8MUL3 147 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 PRAC2D3DTV9 90 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 PPP1R17O96001 155 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 CSN3P07498 182 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 IFI27P40305 119 aaPredicted RBP6.31□□□□□ -1.4
VPS45-208ENST00000478999 ERCC8Q13216 396 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 SLC25A34Q6PIV7 304 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 C10orf99Q6UWK7 81 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 RNF182Q8N6D2 247 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 MCRIP2Q9BUT9 160 aaKnown RBP6.31□□□□□ -1.4
VPS45-208ENST00000478999 PEF1Q9UBV8 284 aaKnown RBP6.31□□□□□ -1.4
VPS45-208ENST00000478999 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
VPS45-208ENST00000478999 IGKV3D-20A0A0C4DH25 116 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 NPYP01303 97 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 HOXD3P31249 432 aaPredicted RBP6.3□□□□□ -1.4
VPS45-208ENST00000478999 IGFL4Q6B9Z1 124 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 Q8N8P6 123 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 RNF185Q96GF1 192 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 FAM19A4Q96LR4 140 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 B9D2Q9BPU9 175 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 SMPXQ9UHP9 88 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 CSMD3Q7Z407 3707 aa6.3□□□□□ -1.4
VPS45-208ENST00000478999 IGHV3-66A0A0C4DH42 116 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 LINC01549A6NIU2 74 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 M0R381 172 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 DLEU1O43261 78 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 ZNF207O43670 478 aaKnown RBP6.29□□□□□ -1.4
VPS45-208ENST00000478999 ATP5LO75964 103 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 TNFRSF6BO95407 300 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 ELANEP08246 267 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 PSMB8P28062 276 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 FCER1GP30273 86 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 ASIPP42127 132 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 TCTEX1D4Q5JR98 221 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 UNQ9165/PRO28630Q6UXU0 137 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 ZNF575Q86XF7 245 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 ATOH7Q8N100 152 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 ZFAND2AQ8N6M9 145 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 WFDC9Q8NEX5 89 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 OR8A1Q8NGG7 326 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 IFI27L1Q96BM0 104 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 RHPN1-AS1Q9BWJ2 59 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
VPS45-208ENST00000478999 IGHV3OR16-13A0A075B7E8 117 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 A0A096LNJ9 63 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 IGHV3-74A0A0B4J1X5 117 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 C3orf84H3BNL1 204 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 LGALS9O00182 355 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 NXPH4O95158 308 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 COX8AP10176 69 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 G0S2P27469 103 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 KRTAP10-11P60412 298 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 KIR3DS1Q14943 382 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 SPANXN1Q5VSR9 72 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 LINC00173Q6ZV60 143 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 RNF152Q8N8N0 203 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 MYOZ3Q8TDC0 251 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 ORAOV1Q8WV07 137 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 C20orf173Q96LM9 149 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 SCRT2Q9NQ03 307 aa6.28□□□□□ -1.4
VPS45-208ENST00000478999 HUWE1Q7Z6Z7 4374 aaKnown RBP6.27□□□□□ -1.41
VPS45-208ENST00000478999 IGHV3-49A0A0A0MS15 119 aa6.27□□□□□ -1.41
VPS45-208ENST00000478999 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
VPS45-208ENST00000478999 SIVA1O15304 175 aa6.27□□□□□ -1.41
VPS45-208ENST00000478999 TRBV12-3P01733 135 aa6.27□□□□□ -1.41
VPS45-208ENST00000478999 HLA-DRB4P13762 266 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms