RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	NCR3	O14931	201 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	IGHV3-30	P01768	117 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	IGHV3-30-5	P0DP03	117 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	SPTSSA	Q969W0	71 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	ODF3	Q96PU9	254 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	SDF2	Q99470	211 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	C2orf88	Q9BSF0	95 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	RERGL	Q9H628	205 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	TMEM242	Q9NWH2	141 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	GNG8	Q9UK08	70 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	ARFGEF3	Q5TH69	2177 aa		1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	ZFC3H1	O60293	1989 aa	Known RBP	1.27	□□□□□ -2.21
RBM39-231	ENST00000477334	PLXNA4	Q9HCM2	1894 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	SI	P14410	1827 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	KIDINS220	Q9ULH0	1771 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	LRP5	O75197	1615 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	CC2D2A	Q9P2K1	1620 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	PIGBOS1	A0A0B4J2F0	54 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334		A6NIN4	97 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	HIGD1C	A8MV81	97 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	LINC00587	B1AMM8	73 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	PIRT	P0C851	137 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	MEIG1	Q5JSS6	88 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	OR2T2	Q6IF00	324 aa		1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	SNRNP25	Q9BV90	132 aa	Known RBP	1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	HEATR1	Q9H583	2144 aa	Known RBP	1.26	□□□□□ -2.21
RBM39-231	ENST00000477334	ADGRB1	O14514	1584 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	SETBP1	Q9Y6X0	1596 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	INTS1	Q8N201	2190 aa	Known RBP	1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	DAPK1	P53355	1430 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	TANC2	Q9HCD6	1990 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	ANK1	P16157	1881 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	TNRC6B	Q9UPQ9	1833 aa	Known RBP	1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	TCRBV3S1	A0A5B6	114 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	ANG	P03950	147 aa	Known RBP	1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	AKAIN1	P0CW23	69 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	LYNX1	P0DP58	116 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	FGF7	P21781	194 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	MRPS10	P82664	201 aa	Known RBP	1.25	□□□□□ -2.21
RBM39-231	ENST00000477334		Q6ZQY7	126 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	NAA60	Q9H7X0	242 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	MRPL35	Q9NZE8	188 aa	Known RBP	1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	C22orf24	Q9Y442	160 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	MUC4	Q99102	2169 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	FAM135A	Q9P2D6	1515 aa		1.25	□□□□□ -2.21
RBM39-231	ENST00000477334	CFTR	P13569	1480 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	MBD5	Q9P267	1494 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	UTRN	P46939	3433 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	PHLPP1	O60346	1717 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	PEAK1	Q9H792	1746 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	MYOF	Q9NZM1	2061 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	SNAPC5	O75971	98 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	NDUFB6	O95139	128 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	IFNG	P01579	166 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	HIST1H1D	P16402	221 aa	Known RBP	1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	SLC48A1	Q6P1K1	146 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	CYP2G1P	Q6ZSU1	146 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	DPH3	Q96FX2	82 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	AMELY	Q99218	206 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	CGREF1	Q99674	301 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	NDUFA12	Q9UI09	145 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	HELZ	P42694	1942 aa	Known RBP	1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	ALPK3	Q96L96	1907 aa		1.24	□□□□□ -2.21
RBM39-231	ENST00000477334	NALCN	Q8IZF0	1738 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	TNRC18	O15417	2968 aa	Predicted RBP	1.23	□□□□□ -2.21
RBM39-231	ENST00000477334		E9PCH4	1651 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	KIAA1549	Q9HCM3	1950 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	LAMA2	P24043	3122 aa	Known RBP	1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	PTPRF	P10586	1907 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	TENM1	Q9UKZ4	2725 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	CCK	P06307	115 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	ARL14EPL	P0DKL9	152 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	SLC25A6	P12236	298 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	FXYD4	P59646	89 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	LINC00575	Q6W349	94 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334		Q86TA4	180 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	NDUFA11	Q86Y39	141 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	SEC11C	Q9BY50	192 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	RPRM	Q9NS64	109 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	IQSEC2	Q5JU85	1478 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	BCL9L	Q86UU0	1499 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	UNC13C	Q8NB66	2214 aa		1.23	□□□□□ -2.21
RBM39-231	ENST00000477334	TOP2B	Q02880	1626 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	KTN1	Q86UP2	1357 aa	Known RBP	1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	PHRF1	Q9P1Y6	1649 aa	Known RBP	1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	PDE4DIP	Q5VU43	2346 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	COL6A3	P12111	3177 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	TEX49	A0A1B0GTD5	131 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	MIF4GD	A9UHW6	222 aa	Known RBP	1.22	□□□□□ -2.21
RBM39-231	ENST00000477334		F6UZH7	168 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	FXYD1	O00168	92 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	PITX3	O75364	302 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	IFNA17	P01571	189 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	TFF1	P04155	84 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	S100A1	P23297	94 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	S100A7L2	Q5SY68	101 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	C12orf73	Q69YU5	71 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	XAF1	Q6GPH4	301 aa		1.22	□□□□□ -2.21
RBM39-231	ENST00000477334	SBSPON	Q8IVN8	264 aa		1.22	□□□□□ -2.21

Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms