RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 IGLL5B9A064 214 aa9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 CIDEAO60543 219 aa9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 IGLV2-8P01709 118 aa9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SRP19P09132 144 aaKnown RBP9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SLAQ13239 276 aa9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 C9orf85Q96MD7 179 aa9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SMIM7Q9BQ49 75 aa9.35□□□□□ -0.91
HLA-DPA1-246ENST00000476642 TRBV20OR9-2A0A075B6H5 130 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 F5H768 121 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SNAPINO95295 136 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 P01737 135 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 MED14OSP0DP75 135 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 ZNF876PQ49A33 203 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SYT8Q8NBV8 401 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 MRPL16Q9NX20 251 aaKnown RBP9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 SACSQ9NZJ4 4579 aa9.34□□□□□ -0.91
HLA-DPA1-246ENST00000476642 RNASE3P12724 160 aaKnown RBP9.33□□□□□ -0.92
HLA-DPA1-246ENST00000476642 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
HLA-DPA1-246ENST00000476642 OCC1Q8TAD7 63 aa9.33□□□□□ -0.92
HLA-DPA1-246ENST00000476642 PHLDA3Q9Y5J5 127 aa9.33□□□□□ -0.92
HLA-DPA1-246ENST00000476642 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
HLA-DPA1-246ENST00000476642 STARD9Q9P2P6 4700 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 IGHV4-4A0A075B6R2 117 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TMSB15BA0A087X1C1 80 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TRAV4A0A0B4J268 109 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TMEM218A2RU14 115 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 C19orf71A6NCJ1 209 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 H3BVH4 76 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 ARMS2P0C7Q2 107 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 CARHSP1Q9Y2V2 147 aaKnown RBP9.32□□□□□ -0.92
HLA-DPA1-246ENST00000476642 CSMD3Q7Z407 3707 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 EPPK1P58107 5090 aaKnown RBP9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 DNAH1Q9P2D7 4330 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 GRIFINA4D1Z8 144 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 PGPEP1LA6NFU8 196 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 A8MWV9 139 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 H3BNG1 76 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TMEM241Q24JQ0 296 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SOHLH1Q5JUK2 328 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 C10orf91Q5T1B1 145 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 ZFP82Q8N141 532 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 OR2D3Q8NGH3 330 aa9.31□□□□□ -0.92
HLA-DPA1-246ENST00000476642 LYSTQ99698 3801 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TRGV4A0A0C4DH28 118 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 F8W036 122 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 LY6G6CO95867 125 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 S100A8P05109 93 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 OR5AL1P0C617 328 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TMEM88Q6PEY1 159 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 NUDT10Q8NFP7 164 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 NUDT11Q96G61 164 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SEC11CQ9BY50 192 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SCRT2Q9NQ03 307 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 NAT8Q9UHE5 227 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 PRO0255Q9UI72 69 aa9.3□□□□□ -0.92
HLA-DPA1-246ENST00000476642 A0A1W2PPQ1 181 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 F2Z2F3 143 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 AKR1D1P51857 326 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 ERVFC1-1P60608 527 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 RPL19P84098 196 aaKnown RBP9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 ATRAIDQ6UW56 229 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 LINC01551Q86U37 167 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 C12orf57Q99622 126 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 RPP21Q9H633 154 aaKnown RBP9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 APLNQ9ULZ1 77 aa9.29□□□□□ -0.92
HLA-DPA1-246ENST00000476642 PCP4L1A6NKN8 68 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 K7EN84 100 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 RHODO00212 210 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 RS1O15537 224 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SNAI2O43623 268 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 GATCO43716 136 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SMIM6P0DI80 62 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 RAB5BP61020 215 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SRSF3P84103 164 aaKnown RBP9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SPANXN1Q5VSR9 72 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 C15orf54Q8N8G6 183 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 LINC00476Q8WZB0 136 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 SSBP4Q9BWG4 385 aaPredicted RBP9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 HHLA3Q9XRX5 114 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 MUC4Q99102 2169 aa9.28□□□□□ -0.92
HLA-DPA1-246ENST00000476642 TRAV26-1A0A087WT03 109 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 A8MWL6 223 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 M0R381 172 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 IGHV3-53P01767 116 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 P0DMU3 169 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 FAM231AP0DMU4 169 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 FAM231CP0DMU5 169 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 HOXA5P20719 270 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 CACNG7P62955 275 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 CT83Q5H943 113 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 CFAP126Q5VTH2 177 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 LGALS9CQ6DKI2 356 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 ZFP2Q6ZN57 461 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 FER1L6-AS1Q8NA97 138 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 RNASE7Q9H1E1 156 aaKnown RBP9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 OSTCQ9NRP0 149 aa9.27□□□□□ -0.93
HLA-DPA1-246ENST00000476642 C9JQL5 133 aa9.26□□□□□ -0.93
HLA-DPA1-246ENST00000476642 PAX4O43316 350 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms