RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 HOXA5P20719 270 aa20.78■□□□□ 0.92
HOXB3-208ENST00000476342 LYSTQ99698 3801 aa20.78■□□□□ 0.92
HOXB3-208ENST00000476342 TRAV4A0A0B4J268 109 aa20.78■□□□□ 0.92
HOXB3-208ENST00000476342 IGHV3-53P01767 116 aa20.78■□□□□ 0.92
HOXB3-208ENST00000476342 SRSF3P84103 164 aaKnown RBP20.78■□□□□ 0.92
HOXB3-208ENST00000476342 ZNF575Q86XF7 245 aa20.78■□□□□ 0.92
HOXB3-208ENST00000476342 K7EN84 100 aa20.77■□□□□ 0.91
HOXB3-208ENST00000476342 MED14OSP0DP75 135 aa20.77■□□□□ 0.91
HOXB3-208ENST00000476342 PIK3CD-AS1Q5SR53 167 aa20.77■□□□□ 0.91
HOXB3-208ENST00000476342 C15orf53Q8NAA6 179 aa20.77■□□□□ 0.91
HOXB3-208ENST00000476342 OR4C5Q8NGB2 326 aa20.77■□□□□ 0.91
HOXB3-208ENST00000476342 PHLDA3Q9Y5J5 127 aa20.77■□□□□ 0.91
HOXB3-208ENST00000476342 RPS20P60866 119 aaKnown RBP20.76■□□□□ 0.91
HOXB3-208ENST00000476342 FAM74A3Q4VXF1 159 aa20.76■□□□□ 0.91
HOXB3-208ENST00000476342 SYT8Q8NBV8 401 aa20.76■□□□□ 0.91
HOXB3-208ENST00000476342 OR2D3Q8NGH3 330 aa20.76■□□□□ 0.91
HOXB3-208ENST00000476342 XKRY2A2RUG3 117 aa20.75■□□□□ 0.91
HOXB3-208ENST00000476342 SCRT2Q9NQ03 307 aa20.75■□□□□ 0.91
HOXB3-208ENST00000476342 KMT2CQ8NEZ4 4911 aaKnown RBP20.74■□□□□ 0.91
HOXB3-208ENST00000476342 TRAV26-1A0A087WT03 109 aa20.74■□□□□ 0.91
HOXB3-208ENST00000476342 C9JQL5 133 aa20.74■□□□□ 0.91
HOXB3-208ENST00000476342 SFTA3P0C7M3 94 aa20.74■□□□□ 0.91
HOXB3-208ENST00000476342 SLAQ13239 276 aa20.74■□□□□ 0.91
HOXB3-208ENST00000476342 ZNF479Q96JC4 524 aa20.74■□□□□ 0.91
HOXB3-208ENST00000476342 TRGV4A0A0C4DH28 118 aa20.73■□□□□ 0.91
HOXB3-208ENST00000476342 POM121L12Q8N7R1 296 aa20.73■□□□□ 0.91
HOXB3-208ENST00000476342 NUDT10Q8NFP7 164 aa20.73■□□□□ 0.91
HOXB3-208ENST00000476342 NUDT11Q96G61 164 aa20.73■□□□□ 0.91
HOXB3-208ENST00000476342 LCE6AA0A183 80 aa20.72■□□□□ 0.91
HOXB3-208ENST00000476342 LINC01551Q86U37 167 aa20.71■□□□□ 0.91
HOXB3-208ENST00000476342 ZFP82Q8N141 532 aa20.71■□□□□ 0.91
HOXB3-208ENST00000476342 LINC00476Q8WZB0 136 aa20.71■□□□□ 0.91
HOXB3-208ENST00000476342 RNASE7Q9H1E1 156 aaKnown RBP20.71■□□□□ 0.91
HOXB3-208ENST00000476342 A0A0J9YY99 117 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 A8MWV9 139 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 RS1O15537 224 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 CIDEAO60543 219 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 FHL2Q14192 279 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 PRO0255Q9UI72 69 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 H3BNG1 76 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 SNAI2O43623 268 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 OR5AL1P0C617 328 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 CFAP126Q5VTH2 177 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 DMRTA1Q5VZB9 504 aa20.7■□□□□ 0.9
HOXB3-208ENST00000476342 RPP21Q9H633 154 aaKnown RBP20.7■□□□□ 0.9
HOXB3-208ENST00000476342 NACAE9PAV3 2078 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 M0R381 172 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 NUDT3O95989 172 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 TMEM241Q24JQ0 296 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 SOHLH1Q5JUK2 328 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 LGALS9CQ6DKI2 356 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 FAM231DQ6ZW35 169 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 SSBP4Q9BWG4 385 aaPredicted RBP20.69■□□□□ 0.9
HOXB3-208ENST00000476342 HHLA3Q9XRX5 114 aa20.69■□□□□ 0.9
HOXB3-208ENST00000476342 NAT8Q9UHE5 227 aa20.68■□□□□ 0.9
HOXB3-208ENST00000476342 ALMS1Q8TCU4 4167 aa20.68■□□□□ 0.9
HOXB3-208ENST00000476342 PAX4O43316 350 aa20.67■□□□□ 0.9
HOXB3-208ENST00000476342 LY6G6CO95867 125 aa20.67■□□□□ 0.9
HOXB3-208ENST00000476342 GZMBP10144 247 aa20.67■□□□□ 0.9
HOXB3-208ENST00000476342 ERVFC1-1P60608 527 aa20.67■□□□□ 0.9
HOXB3-208ENST00000476342 FER1L6-AS1Q8NA97 138 aa20.67■□□□□ 0.9
HOXB3-208ENST00000476342 CRYBA4P53673 196 aa20.66■□□□□ 0.9
HOXB3-208ENST00000476342 GATCO43716 136 aaKnown RBP20.65■□□□□ 0.9
HOXB3-208ENST00000476342 P0DMU3 169 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 FAM231AP0DMU4 169 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 FAM231CP0DMU5 169 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 SPANXN1Q5VSR9 72 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 OR10AG1Q8NH19 301 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 VSIG2Q96IQ7 327 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 TPPP3Q9BW30 176 aa20.65■□□□□ 0.9
HOXB3-208ENST00000476342 IGLC6P0CF74 106 aa20.64■□□□□ 0.89
HOXB3-208ENST00000476342 A0A1W2PPQ1 181 aa20.63■□□□□ 0.89
HOXB3-208ENST00000476342 NXPH4O95158 308 aa20.63■□□□□ 0.89
HOXB3-208ENST00000476342 ZFP2Q6ZN57 461 aa20.63■□□□□ 0.89
HOXB3-208ENST00000476342 RPL23P62829 140 aaKnown RBP20.62■□□□□ 0.89
HOXB3-208ENST00000476342 SFRP2Q96HF1 295 aa20.62■□□□□ 0.89
HOXB3-208ENST00000476342 F2Z2F3 143 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 RHODO00212 210 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 ADIRFQ15847 76 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 JPT2Q9H910 190 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 SACSQ9NZJ4 4579 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 IGHV3-73A0A0B4J1V6 119 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 GATA1P15976 413 aaPredicted RBP20.61■□□□□ 0.89
HOXB3-208ENST00000476342 C15orf54Q8N8G6 183 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 OSTCQ9NRP0 149 aa20.61■□□□□ 0.89
HOXB3-208ENST00000476342 MUC21A0A0G2JKD1 596 aa20.6■□□□□ 0.89
HOXB3-208ENST00000476342 MUC21A0A140T8X8 626 aa20.6■□□□□ 0.89
HOXB3-208ENST00000476342 CT83Q5H943 113 aa20.6■□□□□ 0.89
HOXB3-208ENST00000476342 ISOC2Q96AB3 205 aa20.6■□□□□ 0.89
HOXB3-208ENST00000476342 ICOSQ9Y6W8 199 aa20.6■□□□□ 0.89
HOXB3-208ENST00000476342 A8MWL6 223 aa20.59■□□□□ 0.89
HOXB3-208ENST00000476342 CACNG7P62955 275 aa20.59■□□□□ 0.89
HOXB3-208ENST00000476342 DNAH1Q9P2D7 4330 aa20.58■□□□□ 0.88
HOXB3-208ENST00000476342 FAM74A4Q5TZK3 123 aa20.58■□□□□ 0.88
HOXB3-208ENST00000476342 UQCC3Q6UW78 93 aa20.58■□□□□ 0.88
HOXB3-208ENST00000476342 UBE2DNLQ8IWF7 75 aa20.58■□□□□ 0.88
HOXB3-208ENST00000476342 SAMD10Q9BYL1 202 aa20.58■□□□□ 0.88
HOXB3-208ENST00000476342 TRBV6-4A0A1B0GX49 114 aa20.57■□□□□ 0.88
HOXB3-208ENST00000476342 LYZL1Q6UWQ5 148 aa20.57■□□□□ 0.88
HOXB3-208ENST00000476342 A0A096LPF7 62 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms