RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 FAT3Q8TDW7 4589 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 GGTLC3B5MD39 225 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 TAAR5O14804 337 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 CDC34P49427 236 aaPredicted RBP8.68□□□□□ -1.02
MRPL55-228ENST00000476267 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 NDFIP1Q9BT67 221 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 PSG8Q9UQ74 426 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 LRP1Q07954 4544 aaKnown RBP8.68□□□□□ -1.02
MRPL55-228ENST00000476267 HMCN2Q8NDA2 5059 aa8.68□□□□□ -1.02
MRPL55-228ENST00000476267 SSNA1O43805 119 aa8.67□□□□□ -1.02
MRPL55-228ENST00000476267 GCHFRP30047 84 aa8.67□□□□□ -1.02
MRPL55-228ENST00000476267 FLI1Q01543 452 aaPredicted RBP8.67□□□□□ -1.02
MRPL55-228ENST00000476267 UFSP1Q6NVU6 142 aa8.67□□□□□ -1.02
MRPL55-228ENST00000476267 RAB24Q969Q5 203 aa8.67□□□□□ -1.02
MRPL55-228ENST00000476267 PARLQ9H300 379 aa8.67□□□□□ -1.02
MRPL55-228ENST00000476267 IGKV3D-20A0A0C4DH25 116 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 SMUG1Q53HV7 270 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 LINC00479Q96M42 142 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 PSMG3Q9BT73 122 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-228ENST00000476267 Q9UF83 564 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 EPDR1Q9UM22 224 aa8.66□□□□□ -1.02
MRPL55-228ENST00000476267 FLG2Q5D862 2391 aaPredicted RBP8.66□□□□□ -1.02
MRPL55-228ENST00000476267 CYB561D1Q8N8Q1 229 aa8.65□□□□□ -1.02
MRPL55-228ENST00000476267 TM2D2Q9BX73 214 aa8.65□□□□□ -1.02
MRPL55-228ENST00000476267 PKHD1L1Q86WI1 4243 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 K7EQM0 130 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 ATP6V0CP27449 155 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 SUMO1P63165 101 aaKnown RBP8.64□□□□□ -1.03
MRPL55-228ENST00000476267 ZFP69Q49AA0 526 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 DAZ4Q86SG3 579 aaKnown RBP8.64□□□□□ -1.03
MRPL55-228ENST00000476267 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 HSD17B11Q8NBQ5 300 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 AQP10Q96PS8 301 aa8.64□□□□□ -1.03
MRPL55-228ENST00000476267 DAZ3Q9NR90 486 aaKnown RBP8.64□□□□□ -1.03
MRPL55-228ENST00000476267 TRAV8-3A0A0A6YYJ7 113 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 GAGE12JA6NER3 117 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 A6NHS1 94 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 A8MWV9 139 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 KRTAP29-1A8MX34 341 aaPredicted RBP8.63□□□□□ -1.03
MRPL55-228ENST00000476267 KRTAP10-4P60372 401 aaPredicted RBP8.63□□□□□ -1.03
MRPL55-228ENST00000476267 SERF2P84101 59 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 GAGE1Q13065 139 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 GAGE4Q13068 117 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 GAGE5Q13069 117 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 GAGE13Q4V321 117 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 SAPCD1Q5SSQ6 148 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 LINC00528Q8N1L1 170 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 SAMD10Q9BYL1 202 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 JPT2Q9H910 190 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
MRPL55-228ENST00000476267 A0A1W2PRE2 83 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 LECT2O14960 151 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 CXorf1O96002 111 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 DNLZQ5SXM8 178 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 C14orf178Q8N769 122 aaPredicted RBP8.62□□□□□ -1.03
MRPL55-228ENST00000476267 DNAJC30Q96LL9 226 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 SH3BGRL3Q9H299 93 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 IL36BQ9NZH7 164 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 ARL2-SNX15V9GYD0 113 aa8.62□□□□□ -1.03
MRPL55-228ENST00000476267 MBP02144 154 aa8.61□□□□□ -1.03
MRPL55-228ENST00000476267 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
MRPL55-228ENST00000476267 DEFA1P59665 94 aa8.61□□□□□ -1.03
MRPL55-228ENST00000476267 DEFA3P59666 94 aa8.61□□□□□ -1.03
MRPL55-228ENST00000476267 ZNF726P1Q15940 193 aa8.61□□□□□ -1.03
MRPL55-228ENST00000476267 TNFSF18Q9UNG2 199 aa8.61□□□□□ -1.03
MRPL55-228ENST00000476267 ALG5Q9Y673 324 aa8.61□□□□□ -1.03
MRPL55-228ENST00000476267 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.6□□□□□ -1.03
MRPL55-228ENST00000476267 TRAV34A0A0B4J273 112 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 J3QL48 77 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 ASIPP42127 132 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 CRIP1P50238 77 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 TOR2AQ5JU69 321 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 SCXQ7RTU7 201 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 COX8CQ7Z4L0 72 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 Q86TA4 180 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 OR2T35Q8NGX2 323 aa8.6□□□□□ -1.03
MRPL55-228ENST00000476267 A0A087WWC5 75 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 RNF222A6NCQ9 220 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 FABP5P3A8MUU1 101 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 H3BVH4 76 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 FGF8P55075 233 aaPredicted RBP8.59□□□□□ -1.03
MRPL55-228ENST00000476267 LGALSLQ3ZCW2 172 aaPredicted RBP8.59□□□□□ -1.03
MRPL55-228ENST00000476267 LINC01620Q4KN68 170 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 Q5BKY6 102 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 DMRTA1Q5VZB9 504 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 NIT1Q86X76 327 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 BAALCQ8WXS3 180 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 ACTR3CQ9C0K3 210 aaPredicted RBP8.59□□□□□ -1.03
MRPL55-228ENST00000476267 COX11Q9Y6N1 276 aa8.59□□□□□ -1.03
MRPL55-228ENST00000476267 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
MRPL55-228ENST00000476267 S100A4P26447 101 aaKnown RBP8.58□□□□□ -1.04
MRPL55-228ENST00000476267 ATRAIDQ6UW56 229 aa8.58□□□□□ -1.04
MRPL55-228ENST00000476267 DEFB104AQ8WTQ1 72 aa8.58□□□□□ -1.04
MRPL55-228ENST00000476267 ZC2HC1AQ96GY0 325 aa8.58□□□□□ -1.04
MRPL55-228ENST00000476267 B4DEV8 164 aa8.57□□□□□ -1.04
MRPL55-228ENST00000476267 RHODO00212 210 aa8.57□□□□□ -1.04
MRPL55-228ENST00000476267 PEX7O00628 323 aa8.57□□□□□ -1.04
MRPL55-228ENST00000476267 ARMS2P0C7Q2 107 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms