RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 KANTRA0A1W2PQU2 76 aa11.82□□□□□ -0.52
PCGF3-209ENST00000475288 ZNF876PQ49A33 203 aa11.82□□□□□ -0.52
PCGF3-209ENST00000475288 PQLC2Q6ZP29 291 aa11.82□□□□□ -0.52
PCGF3-209ENST00000475288 SLC51BQ86UW2 128 aa11.82□□□□□ -0.52
PCGF3-209ENST00000475288 STOML3Q8TAV4 291 aa11.82□□□□□ -0.52
PCGF3-209ENST00000475288 IGHV3-30P01768 117 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 IGHV3-33P01772 117 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 IGHV3-30-3P0DP02 117 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 IGHV3-30-5P0DP03 117 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 EIF5AP63241 154 aaKnown RBP11.81□□□□□ -0.52
PCGF3-209ENST00000475288 GOLT1AQ6ZVE7 132 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 LINC00528Q8N1L1 170 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 CYTL1Q9NRR1 136 aa11.81□□□□□ -0.52
PCGF3-209ENST00000475288 TRAV8-3A0A0A6YYJ7 113 aa11.8□□□□□ -0.52
PCGF3-209ENST00000475288 SERTM2A0A1B0GWG4 89 aa11.8□□□□□ -0.52
PCGF3-209ENST00000475288 F6UZH7 168 aa11.8□□□□□ -0.52
PCGF3-209ENST00000475288 MGST1P10620 155 aaKnown RBP11.8□□□□□ -0.52
PCGF3-209ENST00000475288 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
PCGF3-209ENST00000475288 C9orf85Q96MD7 179 aa11.8□□□□□ -0.52
PCGF3-209ENST00000475288 TRAV8-1A0A0A6YYK1 113 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 BORCS7-ASMTA0A0B4J1R7 106 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 WFDC2Q14508 124 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 DPPA3Q6W0C5 159 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 SCGB1C1Q8TD33 95 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 WFDC1Q9HC57 220 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 RPH3ALQ9UNE2 315 aa11.79□□□□□ -0.52
PCGF3-209ENST00000475288 LINC00694P0DN24 101 aa11.78□□□□□ -0.52
PCGF3-209ENST00000475288 TOR2AQ5JU69 321 aa11.78□□□□□ -0.52
PCGF3-209ENST00000475288 NDFIP1Q9BT67 221 aa11.78□□□□□ -0.52
PCGF3-209ENST00000475288 COX11Q9Y6N1 276 aa11.78□□□□□ -0.52
PCGF3-209ENST00000475288 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
PCGF3-209ENST00000475288 PIK3CD-AS1Q5SR53 167 aa11.77□□□□□ -0.53
PCGF3-209ENST00000475288 SERTAD4-AS1Q5TG53 156 aa11.77□□□□□ -0.53
PCGF3-209ENST00000475288 RPL7L1Q6DKI1 246 aaKnown RBP11.77□□□□□ -0.53
PCGF3-209ENST00000475288 ZNF471Q9BX82 626 aaPredicted RBP11.77□□□□□ -0.53
PCGF3-209ENST00000475288 HMCN2Q8NDA2 5059 aa11.76□□□□□ -0.53
PCGF3-209ENST00000475288 ACOT6Q3I5F7 207 aaPredicted RBP11.76□□□□□ -0.53
PCGF3-209ENST00000475288 ZNF506Q5JVG8 444 aa11.76□□□□□ -0.53
PCGF3-209ENST00000475288 ZFP2Q6ZN57 461 aa11.76□□□□□ -0.53
PCGF3-209ENST00000475288 SMIM3Q9BZL3 60 aa11.76□□□□□ -0.53
PCGF3-209ENST00000475288 C11orf21Q9P2W6 132 aa11.76□□□□□ -0.53
PCGF3-209ENST00000475288 LRP1Q07954 4544 aaKnown RBP11.75□□□□□ -0.53
PCGF3-209ENST00000475288 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
PCGF3-209ENST00000475288 PSMG3Q9BT73 122 aaPredicted RBP11.75□□□□□ -0.53
PCGF3-209ENST00000475288 A0A087WWC5 75 aa11.74□□□□□ -0.53
PCGF3-209ENST00000475288 IGHV3-73A0A0B4J1V6 119 aa11.74□□□□□ -0.53
PCGF3-209ENST00000475288 A0A1W2PPV4 95 aa11.74□□□□□ -0.53
PCGF3-209ENST00000475288 PGPEP1LA6NFU8 196 aa11.74□□□□□ -0.53
PCGF3-209ENST00000475288 RNASE3P12724 160 aaKnown RBP11.74□□□□□ -0.53
PCGF3-209ENST00000475288 GNG5P63218 68 aa11.74□□□□□ -0.53
PCGF3-209ENST00000475288 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
PCGF3-209ENST00000475288 A8MWV9 139 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 GGTLC3B5MD39 225 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 K7EQM0 130 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 EIF3GO75821 320 aaKnown RBP eCLIP11.73□□□□□ -0.53
PCGF3-209ENST00000475288 GCGP01275 180 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 TCRAP04437 139 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 SEC11BP0C7V7 166 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 EIF5AL1Q6IS14 154 aaKnown RBP11.73□□□□□ -0.53
PCGF3-209ENST00000475288 SCXQ7RTU7 201 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 Q8N3U1 123 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 SUN5Q8TC36 379 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 FAT3Q8TDW7 4589 aa11.73□□□□□ -0.53
PCGF3-209ENST00000475288 OXTP01178 125 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 KRTAP10-4P60372 401 aaPredicted RBP11.72□□□□□ -0.53
PCGF3-209ENST00000475288 SMUG1Q53HV7 270 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 TEX261Q6UWH6 196 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 DAZ4Q86SG3 579 aaKnown RBP11.72□□□□□ -0.53
PCGF3-209ENST00000475288 Q8N976 141 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 OR2G3Q8NGZ4 309 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 RMI2Q96E14 147 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 PARLQ9H300 379 aa11.72□□□□□ -0.53
PCGF3-209ENST00000475288 DAZ3Q9NR90 486 aaKnown RBP11.72□□□□□ -0.53
PCGF3-209ENST00000475288 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.71□□□□□ -0.53
PCGF3-209ENST00000475288 LECT2O14960 151 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 IGLV2-11P01706 119 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 FGF8P55075 233 aaPredicted RBP11.71□□□□□ -0.53
PCGF3-209ENST00000475288 RAB2AP61019 212 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 SERF2P84101 59 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 CYB561D1Q8N8Q1 229 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 SGK494Q96LW2 274 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 LINC00479Q96M42 142 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 CHAC1Q9BUX1 264 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 PSG8Q9UQ74 426 aa11.71□□□□□ -0.53
PCGF3-209ENST00000475288 IFNA7P01567 189 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 STAG3L2P0CL84 134 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 STAG3L3P0CL85 134 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 ARL14EPLP0DKL9 152 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 ATP6V0CP27449 155 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 IFITM2Q01629 132 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 TMEM75Q8N9X5 138 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 OR10G9Q8NGN4 311 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 OR10G7Q8NGN6 311 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 BAALCQ8WXS3 180 aa11.7□□□□□ -0.54
PCGF3-209ENST00000475288 PKHD1L1Q86WI1 4243 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 GAGE12JA6NER3 117 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
PCGF3-209ENST00000475288 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
PCGF3-209ENST00000475288 FLI1Q01543 452 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms