RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 CIDEAO60543 219 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 FHL2Q14192 279 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 EIF5A2Q9GZV4 153 aaKnown RBP11.84□□□□□ -0.51
SCAF11-206ENST00000474828 BIN3Q9NQY0 253 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 LY96Q9Y6Y9 160 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 MUC4Q99102 2169 aa11.84□□□□□ -0.51
SCAF11-206ENST00000474828 PGPEP1LA6NFU8 196 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 M0R036 132 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 IFITM2Q01629 132 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 SLAQ13239 276 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 ZNF876PQ49A33 203 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 PCNPQ8WW12 178 aaKnown RBP11.83□□□□□ -0.52
SCAF11-206ENST00000474828 VSIG2Q96IQ7 327 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 DNAH6Q9C0G6 4158 aa11.83□□□□□ -0.52
SCAF11-206ENST00000474828 RS1O15537 224 aa11.82□□□□□ -0.52
SCAF11-206ENST00000474828 SNAI2O43623 268 aa11.82□□□□□ -0.52
SCAF11-206ENST00000474828 NXPH4O95158 308 aa11.82□□□□□ -0.52
SCAF11-206ENST00000474828 ARMS2P0C7Q2 107 aa11.82□□□□□ -0.52
SCAF11-206ENST00000474828 ZNF479Q96JC4 524 aa11.82□□□□□ -0.52
SCAF11-206ENST00000474828 KMT2AQ03164 3969 aa11.82□□□□□ -0.52
SCAF11-206ENST00000474828 TRAV26-1A0A087WT03 109 aa11.81□□□□□ -0.52
SCAF11-206ENST00000474828 C9JQL5 133 aa11.81□□□□□ -0.52
SCAF11-206ENST00000474828 K7EN84 100 aa11.81□□□□□ -0.52
SCAF11-206ENST00000474828 OR5AL1P0C617 328 aa11.81□□□□□ -0.52
SCAF11-206ENST00000474828 PRO0255Q9UI72 69 aa11.81□□□□□ -0.52
SCAF11-206ENST00000474828 GRIFINA4D1Z8 144 aa11.8□□□□□ -0.52
SCAF11-206ENST00000474828 S100A4P26447 101 aaKnown RBP11.8□□□□□ -0.52
SCAF11-206ENST00000474828 CRYBA4P53673 196 aa11.8□□□□□ -0.52
SCAF11-206ENST00000474828 RPL19P84098 196 aaKnown RBP11.8□□□□□ -0.52
SCAF11-206ENST00000474828 CLLU1Q5K131 121 aa11.8□□□□□ -0.52
SCAF11-206ENST00000474828 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
SCAF11-206ENST00000474828 PRR27Q6MZM9 219 aa11.8□□□□□ -0.52
SCAF11-206ENST00000474828 UFSP1Q6NVU6 142 aa11.8□□□□□ -0.52
SCAF11-206ENST00000474828 H3BVH4 76 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 P0DMU3 169 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 FAM231AP0DMU4 169 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 FAM231CP0DMU5 169 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 SRSF3P84103 164 aaKnown RBP11.79□□□□□ -0.52
SCAF11-206ENST00000474828 OR5I1Q13606 314 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 RNF212Q495C1 297 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 ZFP2Q6ZN57 461 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 FAM231DQ6ZW35 169 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 HHLA3Q9XRX5 114 aa11.79□□□□□ -0.52
SCAF11-206ENST00000474828 A8MWV9 139 aa11.78□□□□□ -0.52
SCAF11-206ENST00000474828 MGST1P10620 155 aaKnown RBP11.78□□□□□ -0.52
SCAF11-206ENST00000474828 RPS20P60866 119 aaKnown RBP11.78□□□□□ -0.52
SCAF11-206ENST00000474828 FAM74A3Q4VXF1 159 aa11.78□□□□□ -0.52
SCAF11-206ENST00000474828 NUDT10Q8NFP7 164 aa11.78□□□□□ -0.52
SCAF11-206ENST00000474828 OR4C5Q8NGB2 326 aa11.78□□□□□ -0.52
SCAF11-206ENST00000474828 NUDT11Q96G61 164 aa11.78□□□□□ -0.52
SCAF11-206ENST00000474828 TMSB15BA0A087X1C1 80 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 IGHV3-53P01767 116 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 SFTA3P0C7M3 94 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 GATA1P15976 413 aaPredicted RBP11.77□□□□□ -0.53
SCAF11-206ENST00000474828 PEA15Q15121 130 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 LINC01551Q86U37 167 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 SFRP2Q96HF1 295 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 SMIM7Q9BQ49 75 aa11.77□□□□□ -0.53
SCAF11-206ENST00000474828 NACAE9PAV3 2078 aa11.76□□□□□ -0.53
SCAF11-206ENST00000474828 P01737 135 aa11.76□□□□□ -0.53
SCAF11-206ENST00000474828 FAM3BP58499 235 aaPredicted RBP11.76□□□□□ -0.53
SCAF11-206ENST00000474828 RAB14P61106 215 aa11.76□□□□□ -0.53
SCAF11-206ENST00000474828 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
SCAF11-206ENST00000474828 DAZAP1Q96EP5 407 aaKnown RBP11.76□□□□□ -0.53
SCAF11-206ENST00000474828 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
SCAF11-206ENST00000474828 A0A096LPF7 62 aa11.75□□□□□ -0.53
SCAF11-206ENST00000474828 TRBV6-4A0A1B0GX49 114 aa11.75□□□□□ -0.53
SCAF11-206ENST00000474828 ZNF727A8MUV8 499 aa11.75□□□□□ -0.53
SCAF11-206ENST00000474828 LY6G6CO95867 125 aa11.75□□□□□ -0.53
SCAF11-206ENST00000474828 ZFP82Q8N141 532 aa11.75□□□□□ -0.53
SCAF11-206ENST00000474828 OR2D3Q8NGH3 330 aa11.75□□□□□ -0.53
SCAF11-206ENST00000474828 TRGV4A0A0C4DH28 118 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 A0A0J9YY99 117 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 PAX4O43316 350 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 CRYGDP07320 174 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 CT83Q5H943 113 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 OR10AG1Q8NH19 301 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 CNFNQ9BYD5 112 aa11.74□□□□□ -0.53
SCAF11-206ENST00000474828 XKRY2A2RUG3 117 aa11.73□□□□□ -0.53
SCAF11-206ENST00000474828 WDR73Q6P4I2 378 aa11.73□□□□□ -0.53
SCAF11-206ENST00000474828 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
SCAF11-206ENST00000474828 RPP21Q9H633 154 aaKnown RBP11.73□□□□□ -0.53
SCAF11-206ENST00000474828 JPT2Q9H910 190 aa11.73□□□□□ -0.53
SCAF11-206ENST00000474828 A0A1W2PPQ1 181 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 F2Z2F3 143 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 RHODO00212 210 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 NUDT3O95989 172 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 CTRLP40313 264 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 FOXA3P55318 350 aaPredicted RBP11.72□□□□□ -0.53
SCAF11-206ENST00000474828 TMEM241Q24JQ0 296 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 SLC25A29Q8N8R3 303 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 FER1L6-AS1Q8NA97 138 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 SAMD10Q9BYL1 202 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 OSTCQ9NRP0 149 aa11.72□□□□□ -0.53
SCAF11-206ENST00000474828 K7EQD1 137 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 GZMBP10144 247 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 CEBPGP53567 150 aa11.71□□□□□ -0.53
SCAF11-206ENST00000474828 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms