RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 PSG3Q16557 428 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 DEFB136Q30KP8 78 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 TM4SF20Q53R12 229 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 TMEM97Q5BJF2 176 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 KPRPQ5T749 579 aaPredicted RBP3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 C9orf66Q5T8R8 295 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 SAMD5Q5TGI4 173 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 UFSP1Q6NVU6 142 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 LYPD1Q8N2G4 141 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 TMEM75Q8N9X5 138 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 C8orf49Q96NF6 230 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 SIGMAR1Q99720 223 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 NDFIP1Q9BT67 221 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 MAP1LC3CQ9BXW4 147 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 SPCS1Q9Y6A9 102 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 IGHV4OR15-8A0A075B7B6 117 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 A0A087WW49 117 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 A0A1B0GUT8 65 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 C9orf118A6NHY6 69 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 K7EP34 96 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 CRXO43186 299 aaPredicted RBP3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 CTSGP08311 255 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 ARL3P36405 182 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 CRYBA4P53673 196 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 KIR3DS1Q14943 382 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 IGFL4Q6B9Z1 124 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 C2orf91Q6ZV80 131 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 NEGR1Q7Z3B1 354 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 C21orf62Q9NYP8 219 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 PEMTQ9UBM1 199 aa3.17□□□□□ -1.9
GAPVD1-216ENST00000474637 TMSB15BA0A087X1C1 80 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 TRBV6-1A0A0K0K1D8 114 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 WIPF1O43516 503 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 HOXD3P31249 432 aaPredicted RBP3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 SLURP1P55000 103 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 CKS1BP61024 79 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 FAM106AQ4KMX7 169 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 FAM162BQ5T6X4 162 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 GPHB5Q86YW7 130 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 ZNF502Q8TBZ5 544 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 CHCHD1Q96BP2 118 aaKnown RBP3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 DUX3Q96PT4 197 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 AAMDCQ9H7C9 122 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 RABAC1Q9UI14 185 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 SMAD5-AS1Q9Y6J3 95 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 IGKV2-40A0A087WW87 121 aaPredicted RBP3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 SERTM2A0A1B0GWG4 89 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 GAGE12HA6NDE8 117 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 A6NDN8 102 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 K7EMI3 77 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 LGALS9O00182 355 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 IGKV2D-40P01614 121 aaPredicted RBP3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 CLEC3BP05452 202 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 COX8AP10176 69 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 CSN1S1P47710 185 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 FXYD7P58549 80 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 HSD52Q0P140 79 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 RIGQ13278 110 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 PDE6HQ13956 83 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 BEAN1Q3B7T3 259 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 LYZL1Q6UWQ5 148 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 MTURNQ8N3F0 131 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 DLX4Q92988 240 aaPredicted RBP3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 SIGLEC8Q9NYZ4 499 aa3.16□□□□□ -1.9
GAPVD1-216ENST00000474637 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.9
GAPVD1-216ENST00000474637 LOC389332A0A1B0GUA5 103 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 A0A1W2PPM0 123 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 TMEM213A2RRL7 107 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 TMEM189A5PLL7 270 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 H3BRM9 83 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 NCR2O95944 276 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 CT45A10P0DMU9 189 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 RPL7P18124 248 aaKnown RBP3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 HLA-DMBP28068 263 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 SEC11AP67812 179 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 TNP2Q05952 138 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 EGFEM1PQ0D2K5 195 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 CLEC19AQ6UXS0 136 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 OR9G4Q8NGQ1 327 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 PRSS3P2Q8NHM4 247 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 CCDC140Q96MF4 163 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 VGLL1Q99990 258 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 UFC1Q9Y3C8 167 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 TRRAPQ9Y4A5 3859 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 IGHV3OR16-13A0A075B7E8 117 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 IGHV3-74A0A0B4J1X5 117 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 NDUFA4O00483 81 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 SH2D1AO60880 128 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 TRBV12-3P01733 135 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 OR5AL1P0C617 328 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 FABP2P12104 132 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 IFI27P40305 119 aaPredicted RBP3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 NMUP48645 174 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 SYNJ2BPP57105 145 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 ERCC8Q13216 396 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 SH2D6Q7Z4S9 175 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 ZNF575Q86XF7 245 aa3.15□□□□□ -1.91
GAPVD1-216ENST00000474637 OR8A1Q8NGG7 326 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms