RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 ZNF674Q2M3X9 581 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 H3BVH4 76 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 CIDEAO60543 219 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 LINC00336Q6ZUF6 198 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 NEGR1Q7Z3B1 354 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 SYT8Q8NBV8 401 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 PTH2Q96A98 100 aa9.85□□□□□ -0.83
VAMP4-203ENST00000474047 MRPS16Q9Y3D3 137 aaKnown RBP9.85□□□□□ -0.83
VAMP4-203ENST00000474047 IGHV3-73A0A0B4J1V6 119 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 NBDYA0A0U1RRE5 68 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 RS1O15537 224 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 RPL35P42766 123 aaKnown RBP9.84□□□□□ -0.83
VAMP4-203ENST00000474047 MEF2BQ02080 365 aaPredicted RBP9.84□□□□□ -0.83
VAMP4-203ENST00000474047 C1orf134Q5TEV5 83 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 CFAP126Q5VTH2 177 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 ALKAL2Q6UX46 152 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 Q6ZR54 194 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 IL36BQ9NZH7 164 aa9.84□□□□□ -0.83
VAMP4-203ENST00000474047 KMT2AQ03164 3969 aa9.83□□□□□ -0.84
VAMP4-203ENST00000474047 PDE6DO43924 150 aa9.83□□□□□ -0.84
VAMP4-203ENST00000474047 ARMS2P0C7Q2 107 aa9.83□□□□□ -0.84
VAMP4-203ENST00000474047 NKX2-5P52952 324 aaPredicted RBP9.83□□□□□ -0.84
VAMP4-203ENST00000474047 BLOC1S1P78537 153 aa9.83□□□□□ -0.84
VAMP4-203ENST00000474047 PRR27Q6MZM9 219 aa9.83□□□□□ -0.84
VAMP4-203ENST00000474047 PHLDA3Q9Y5J5 127 aa9.83□□□□□ -0.84
VAMP4-203ENST00000474047 A8MWV9 139 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 K7EQD1 137 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 TAGLN2P37802 199 aaKnown RBP9.82□□□□□ -0.84
VAMP4-203ENST00000474047 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 PRADC1Q9BSG0 188 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 MED9Q9NWA0 146 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 VAX2Q9UIW0 290 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 BCL2P10415 239 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 MGST1P10620 155 aaKnown RBP9.82□□□□□ -0.84
VAMP4-203ENST00000474047 GATA1P15976 413 aaPredicted RBP9.82□□□□□ -0.84
VAMP4-203ENST00000474047 TTC32Q5I0X7 151 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 LYPD5Q6UWN5 251 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 C11orf52Q96A22 123 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 UPK3BQ9BT76 320 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 DERL1Q9BUN8 251 aa9.82□□□□□ -0.84
VAMP4-203ENST00000474047 VPS13DQ5THJ4 4388 aa9.81□□□□□ -0.84
VAMP4-203ENST00000474047 DNLZQ5SXM8 178 aa9.81□□□□□ -0.84
VAMP4-203ENST00000474047 SH2D6Q7Z4S9 175 aa9.81□□□□□ -0.84
VAMP4-203ENST00000474047 DAZAP1Q96EP5 407 aaKnown RBP9.81□□□□□ -0.84
VAMP4-203ENST00000474047 PRSS29PA6NIE9 313 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 NXPH4O95158 308 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 GNG4P50150 75 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 CENPWQ5EE01 88 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 PIK3CD-AS1Q5SR53 167 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 SLC25A29Q8N8R3 303 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 MLST8Q9BVC4 326 aa9.8□□□□□ -0.84
VAMP4-203ENST00000474047 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 TRBV6-4A0A1B0GX49 114 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 RAB19A4D1S5 217 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 M0R381 172 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 RTL8CO15255 209 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 SIVA1O15304 175 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 RHOHQ15669 191 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 ZFP82Q8N141 532 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 BOLA1Q9Y3E2 137 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 RPL19P84098 196 aaKnown RBP9.79□□□□□ -0.84
VAMP4-203ENST00000474047 ZFP2Q6ZN57 461 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 C6orf223Q8N319 242 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 PARLQ9H300 379 aa9.79□□□□□ -0.84
VAMP4-203ENST00000474047 FAM74A4Q5TZK3 123 aa9.78□□□□□ -0.84
VAMP4-203ENST00000474047 JPT2Q9H910 190 aa9.78□□□□□ -0.84
VAMP4-203ENST00000474047 RHODO00212 210 aa9.77□□□□□ -0.85
VAMP4-203ENST00000474047 BIN3Q9NQY0 253 aa9.77□□□□□ -0.85
VAMP4-203ENST00000474047 DNAH6Q9C0G6 4158 aa9.77□□□□□ -0.85
VAMP4-203ENST00000474047 A0A1W2PPQ1 181 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 MED14OSP0DP75 135 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 SMIM12Q96EX1 92 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 SCRT2Q9NQ03 307 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 TRAV9-2A0A087WT02 112 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 A0A087WWL8 130 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 CXCL1P09341 107 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 SPANXN1Q5VSR9 72 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 SFRP2Q96HF1 295 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 SAMD10Q9BYL1 202 aa9.76□□□□□ -0.85
VAMP4-203ENST00000474047 RPS20P60866 119 aaKnown RBP9.75□□□□□ -0.85
VAMP4-203ENST00000474047 SSTP61278 116 aa9.75□□□□□ -0.85
VAMP4-203ENST00000474047 OR2D3Q8NGH3 330 aa9.75□□□□□ -0.85
VAMP4-203ENST00000474047 XKRY2A2RUG3 117 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 P01737 135 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 CEBPGP53567 150 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 Q6ZSN1 163 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 ZNF575Q86XF7 245 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 ATP6V0E2Q8NHE4 81 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 TPPP3Q9BW30 176 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
VAMP4-203ENST00000474047 LY96Q9Y6Y9 160 aa9.74□□□□□ -0.85
VAMP4-203ENST00000474047 TRAV8-6A0A0B4J262 113 aa9.73□□□□□ -0.85
VAMP4-203ENST00000474047 MUC21A0A0G2JKD1 596 aa9.73□□□□□ -0.85
VAMP4-203ENST00000474047 MUC21A0A140T8X8 626 aa9.73□□□□□ -0.85
VAMP4-203ENST00000474047 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
VAMP4-203ENST00000474047 IGLV2-8P01709 118 aa9.73□□□□□ -0.85
VAMP4-203ENST00000474047 EVI2AP22794 236 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms