RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 C9JCJ5 164 aa12.59□□□□□ -0.39
SNX4-204ENST00000473417 NUDT3O95989 172 aa12.59□□□□□ -0.39
SNX4-204ENST00000473417 RNASE3P12724 160 aaKnown RBP12.59□□□□□ -0.39
SNX4-204ENST00000473417 S100A4P26447 101 aaKnown RBP12.59□□□□□ -0.39
SNX4-204ENST00000473417 FAM3BP58499 235 aaPredicted RBP12.59□□□□□ -0.39
SNX4-204ENST00000473417 CENPWQ5EE01 88 aa12.59□□□□□ -0.39
SNX4-204ENST00000473417 PRR27Q6MZM9 219 aa12.59□□□□□ -0.39
SNX4-204ENST00000473417 TEX261Q6UWH6 196 aa12.59□□□□□ -0.39
SNX4-204ENST00000473417 PCNPQ8WW12 178 aaKnown RBP12.59□□□□□ -0.39
SNX4-204ENST00000473417 C9orf85Q96MD7 179 aa12.59□□□□□ -0.39
SNX4-204ENST00000473417 GRIFINA4D1Z8 144 aa12.58□□□□□ -0.4
SNX4-204ENST00000473417 SFTA3P0C7M3 94 aa12.58□□□□□ -0.4
SNX4-204ENST00000473417 ASIPP42127 132 aa12.58□□□□□ -0.4
SNX4-204ENST00000473417 DYNC1H1Q14204 4646 aaKnown RBP12.57□□□□□ -0.4
SNX4-204ENST00000473417 LINC01559Q495D7 138 aa12.57□□□□□ -0.4
SNX4-204ENST00000473417 ZNF876PQ49A33 203 aa12.57□□□□□ -0.4
SNX4-204ENST00000473417 ZNF479Q96JC4 524 aa12.57□□□□□ -0.4
SNX4-204ENST00000473417 DNAH11Q96DT5 4516 aa12.57□□□□□ -0.4
SNX4-204ENST00000473417 PGPEP1LA6NFU8 196 aa12.56□□□□□ -0.4
SNX4-204ENST00000473417 MGST1P10620 155 aaKnown RBP12.56□□□□□ -0.4
SNX4-204ENST00000473417 GNG4P50150 75 aa12.56□□□□□ -0.4
SNX4-204ENST00000473417 TOR2AQ5JU69 321 aa12.56□□□□□ -0.4
SNX4-204ENST00000473417 ZNF506Q5JVG8 444 aa12.56□□□□□ -0.4
SNX4-204ENST00000473417 TRGV4A0A0C4DH28 118 aa12.55□□□□□ -0.4
SNX4-204ENST00000473417 H3BVH4 76 aa12.55□□□□□ -0.4
SNX4-204ENST00000473417 IGLV2-8P01709 118 aa12.55□□□□□ -0.4
SNX4-204ENST00000473417 FHL2Q14192 279 aa12.55□□□□□ -0.4
SNX4-204ENST00000473417 OR4C5Q8NGB2 326 aa12.55□□□□□ -0.4
SNX4-204ENST00000473417 VSIG2Q96IQ7 327 aa12.55□□□□□ -0.4
SNX4-204ENST00000473417 EIF5A2Q9GZV4 153 aaKnown RBP12.55□□□□□ -0.4
SNX4-204ENST00000473417 PCLOQ9Y6V0 5065 aa12.54□□□□□ -0.4
SNX4-204ENST00000473417 TRBV20OR9-2A0A075B6H5 130 aa12.54□□□□□ -0.4
SNX4-204ENST00000473417 TRAV4A0A0B4J268 109 aa12.54□□□□□ -0.4
SNX4-204ENST00000473417 ARMS2P0C7Q2 107 aa12.54□□□□□ -0.4
SNX4-204ENST00000473417 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
SNX4-204ENST00000473417 ZNF575Q86XF7 245 aa12.54□□□□□ -0.4
SNX4-204ENST00000473417 IL36BQ9NZH7 164 aa12.54□□□□□ -0.4
SNX4-204ENST00000473417 PAX4O43316 350 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 SOHLH1Q5JUK2 328 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 DNLZQ5SXM8 178 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 FAM210AQ96ND0 272 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 PRO0255Q9UI72 69 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 HHLA3Q9XRX5 114 aa12.53□□□□□ -0.4
SNX4-204ENST00000473417 CEBPGP53567 150 aa12.52□□□□□ -0.41
SNX4-204ENST00000473417 CRYBA4P53673 196 aa12.52□□□□□ -0.41
SNX4-204ENST00000473417 C1orf134Q5TEV5 83 aa12.52□□□□□ -0.41
SNX4-204ENST00000473417 PTH2Q96A98 100 aa12.52□□□□□ -0.41
SNX4-204ENST00000473417 PARLQ9H300 379 aa12.52□□□□□ -0.41
SNX4-204ENST00000473417 TMEM250H0YL14 139 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 H3BNG1 76 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 RS1O15537 224 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 SLAQ13239 276 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 CFAP126Q5VTH2 177 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 DAZAP1Q96EP5 407 aaKnown RBP12.51□□□□□ -0.41
SNX4-204ENST00000473417 SMIM12Q96EX1 92 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 LINC00588Q9Y4M8 146 aa12.51□□□□□ -0.41
SNX4-204ENST00000473417 IGHV3-73A0A0B4J1V6 119 aa12.5□□□□□ -0.41
SNX4-204ENST00000473417 CCL18P55774 89 aa12.5□□□□□ -0.41
SNX4-204ENST00000473417 DMRTA1Q5VZB9 504 aa12.5□□□□□ -0.41
SNX4-204ENST00000473417 PHLDA3Q9Y5J5 127 aa12.5□□□□□ -0.41
SNX4-204ENST00000473417 A0A096LPF7 62 aa12.49□□□□□ -0.41
SNX4-204ENST00000473417 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
SNX4-204ENST00000473417 SYT8Q8NBV8 401 aa12.49□□□□□ -0.41
SNX4-204ENST00000473417 SCRT2Q9NQ03 307 aa12.49□□□□□ -0.41
SNX4-204ENST00000473417 MUC4Q99102 2169 aa12.49□□□□□ -0.41
SNX4-204ENST00000473417 C19orf71A6NCJ1 209 aa12.48□□□□□ -0.41
SNX4-204ENST00000473417 M0R381 172 aa12.48□□□□□ -0.41
SNX4-204ENST00000473417 OR2D3Q8NGH3 330 aa12.48□□□□□ -0.41
SNX4-204ENST00000473417 OCC1Q8TAD7 63 aa12.48□□□□□ -0.41
SNX4-204ENST00000473417 JPT2Q9H910 190 aa12.48□□□□□ -0.41
SNX4-204ENST00000473417 BIN3Q9NQY0 253 aa12.48□□□□□ -0.41
SNX4-204ENST00000473417 A8MWV9 139 aa12.47□□□□□ -0.41
SNX4-204ENST00000473417 SRP19P09132 144 aaKnown RBP12.47□□□□□ -0.41
SNX4-204ENST00000473417 CXCL1P09341 107 aa12.47□□□□□ -0.41
SNX4-204ENST00000473417 PIK3CD-AS1Q5SR53 167 aa12.47□□□□□ -0.41
SNX4-204ENST00000473417 ICOSQ9Y6W8 199 aa12.47□□□□□ -0.41
SNX4-204ENST00000473417 K7EN84 100 aa12.46□□□□□ -0.41
SNX4-204ENST00000473417 P01737 135 aa12.46□□□□□ -0.41
SNX4-204ENST00000473417 GZMBP10144 247 aa12.46□□□□□ -0.41
SNX4-204ENST00000473417 ESRGQ1W209 222 aa12.46□□□□□ -0.41
SNX4-204ENST00000473417 ZFP82Q8N141 532 aa12.46□□□□□ -0.41
SNX4-204ENST00000473417 SAMD10Q9BYL1 202 aa12.46□□□□□ -0.41
SNX4-204ENST00000473417 MUC21A0A0G2JKD1 596 aa12.45□□□□□ -0.42
SNX4-204ENST00000473417 MUC21A0A140T8X8 626 aa12.45□□□□□ -0.42
SNX4-204ENST00000473417 CIDEAO60543 219 aa12.45□□□□□ -0.42
SNX4-204ENST00000473417 NDUFS6O75380 124 aaKnown RBP12.45□□□□□ -0.42
SNX4-204ENST00000473417 GYPEP15421 78 aa12.45□□□□□ -0.42
SNX4-204ENST00000473417 GATA1P15976 413 aaPredicted RBP12.45□□□□□ -0.42
SNX4-204ENST00000473417 MRPL23Q16540 153 aaKnown RBP12.45□□□□□ -0.42
SNX4-204ENST00000473417 NUDT10Q8NFP7 164 aa12.45□□□□□ -0.42
SNX4-204ENST00000473417 NUDT11Q96G61 164 aa12.45□□□□□ -0.42
SNX4-204ENST00000473417 LOC100131303A0A0U1RQF7 123 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 K7EQD1 137 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 SNAI2O43623 268 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 RPS20P60866 119 aaKnown RBP12.44□□□□□ -0.42
SNX4-204ENST00000473417 SSTP61278 116 aa12.44□□□□□ -0.42
SNX4-204ENST00000473417 SRSF3P84103 164 aaKnown RBP12.44□□□□□ -0.42
SNX4-204ENST00000473417 C6orf223Q8N319 242 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms