RNA–Protein interactions for RNA: ENST00000473344.1

CKS1B-205, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-205ENST00000473344 CKS1BP61024 79 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 RPL11P62913 178 aaKnown RBP5.06□□□□□ -1.6
CKS1B-205ENST00000473344 WT1-ASQ06250 92 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 HSD52Q0P140 79 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 POU2AF1Q16633 256 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 VWC2Q2TAL6 325 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 ERASQ7Z444 233 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 STHQ8IWL8 128 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 C5orf17Q8NAS9 161 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 OR1L8Q8NGR8 309 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 OR4A16Q8NH70 328 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 C18orf32Q8TCD1 76 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 TSKUQ8WUA8 353 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 SLC25A22Q9H936 323 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 TP53TG3Q9ULZ0 132 aa5.06□□□□□ -1.6
CKS1B-205ENST00000473344 F11RQ9Y624 299 aaKnown RBP5.06□□□□□ -1.6
CKS1B-205ENST00000473344 C15orf61A6NNL5 157 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 F8W1H4 67 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 PGLYRP1O75594 196 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-205ENST00000473344 CTSGP08311 255 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 STAG3L2P0CL84 134 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 HIST1H1EP10412 219 aaKnown RBP5.05□□□□□ -1.6
CKS1B-205ENST00000473344 NTF3P20783 257 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 OPRK1P41145 380 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 MPV17L2Q567V2 206 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 TMEM97Q5BJF2 176 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 SPANXN5Q5MJ07 72 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 UFSP1Q6NVU6 142 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 ZNF818PQ6ZRF7 136 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 DERL1Q9BUN8 251 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 NDUFA4L2Q9NRX3 87 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.05□□□□□ -1.6
CKS1B-205ENST00000473344 CACNG5Q9UF02 275 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 APLNQ9ULZ1 77 aa5.05□□□□□ -1.6
CKS1B-205ENST00000473344 DNAH11Q96DT5 4516 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 IGHV4-4A0A075B6R2 117 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 IGHV3OR16-13A0A075B7E8 117 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 IGHV3-74A0A0B4J1X5 117 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 TRAV10A0A0B4J240 114 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 NPIPB6E9PJ23 425 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 K7EIM0 57 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 GNG7O60262 68 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 TMEM50AO95807 157 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 COX8AP10176 69 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 SRIP30626 198 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 MFAP4P55083 255 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 LINC00310P59036 64 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 TAS2R45P59539 299 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 DEFB131AP59861 70 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 TMEM136Q6ZRR5 245 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 OR10AG1Q8NH19 301 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 NPCDR1Q9BY65 106 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 VSIRQ9H7M9 311 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 MRPL16Q9NX20 251 aaKnown RBP5.04□□□□□ -1.6
CKS1B-205ENST00000473344 PRNDQ9UKY0 176 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 DNAH17Q9UFH2 4485 aa5.04□□□□□ -1.6
CKS1B-205ENST00000473344 IGHV4-28A0A0C4DH34 117 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 SMIM27A0A1W2PRY6 76 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 HELTA6NFD8 242 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 PRSS29PA6NIE9 313 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 FNDC10F2Z333 226 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 K7EQM0 130 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 LEPROTL1O95214 131 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 P0DMU3 169 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 FAM231AP0DMU4 169 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 FAM231CP0DMU5 169 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 IAPPP10997 89 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 MIFP14174 115 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 AZU1P20160 251 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 HLA-DMBP28068 263 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 G6PCP35575 357 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 ATP5IP56385 69 aaPredicted RBP5.03□□□□□ -1.6
CKS1B-205ENST00000473344 PVRIGQ6DKI7 326 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 Q6ZTC4 211 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 FAM231DQ6ZW35 169 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 OR8I2Q8N0Y5 310 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 Q8NAQ8 132 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 OCC1Q8TAD7 63 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 BLNKQ8WV28 456 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 SPANXDQ9BXN6 97 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 SCRT2Q9NQ03 307 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 CLEC5AQ9NY25 188 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 SPANXCQ9NY87 97 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 CYSLTR1Q9Y271 337 aa5.03□□□□□ -1.6
CKS1B-205ENST00000473344 IGHV3-66A0A0C4DH42 116 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 MUC21A0A0G2JKD1 596 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 MUC21A0A140T8X8 626 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 GAGE12HA6NDE8 117 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 H3BP45 60 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 SYS1-DBNDD2H3BUS1 97 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 M0R2N4 97 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 IGHV3-48P01763 117 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 SMIM13P0DJ93 91 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 CT45A10P0DMU9 189 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 S100A7P31151 101 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 CSN1S1P47710 185 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 MUC21Q5SSG8 566 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 LYRM7Q5U5X0 104 aa5.02□□□□□ -1.61
CKS1B-205ENST00000473344 MORN3Q6PF18 240 aaPredicted RBP5.02□□□□□ -1.61
CKS1B-205ENST00000473344 FOXI2Q6ZQN5 318 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms