RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 LINC00854A0A1B0GVQ3 168 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 CCDC160A6NGH7 325 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 FBLL1A6NHQ2 334 aaKnown RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 FAM25EA8MYX2 175 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 E5RGE8 158 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 H3BQ15 152 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 K7EQM0 130 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 M0R2P5 195 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 VCYO14598 125 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 OR7C2O60412 319 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 PAGE4O60829 102 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 IGHV3-53P01767 116 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 MGST1P10620 155 aaKnown RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 FGF7P21781 194 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 XGP55808 180 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 LINC01547P58512 204 aaPredicted RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 S100A10P60903 97 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 PKIAP61925 76 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 UBE2L3P68036 154 aaKnown RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 ZNF266Q14584 549 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 ELOBQ15370 118 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 C14orf177Q52M58 125 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 Q6AWC8 147 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 FAM122CQ6P4D5 195 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 WFDC10BQ8IUB3 73 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 ARL6IP6Q8N6S5 226 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 ATP6V0E2Q8NHE4 81 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 BLNKQ8WV28 456 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 CHCHD7Q9BUK0 85 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 NPCDR1Q9BY65 106 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 PARD6GQ9BYG4 376 aaPredicted RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 MRPL16Q9NX20 251 aaKnown RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 URGCP-MRPS24S4R325 110 aa2.35□□□□□ -2.03
XRN1-209ENST00000472625 SRRM2Q9UQ35 2752 aaKnown RBP2.35□□□□□ -2.03
XRN1-209ENST00000472625 TRBV6-4A0A1B0GX49 114 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 C5orf51A6NDU8 294 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 IBA57-AS1B1ANH7 110 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 GGTLC3B5MD39 225 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 H3BTX0 84 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 M0R3E3 92 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 PRAF2O60831 178 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 CST7O76096 145 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 OXTP01178 125 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 NBEAP1P0C6P0 100 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 FGF8P55075 233 aaPredicted RBP2.34□□□□□ -2.03
XRN1-209ENST00000472625 KRTAP10-12P60413 245 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 CYCSP99999 105 aaKnown RBP2.34□□□□□ -2.03
XRN1-209ENST00000472625 CD300CQ08708 224 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 TMEM183BQ1AE95 376 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 LELP1Q5T871 98 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 MIC13Q5XKP0 118 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 TMEM183AQ8IXX5 376 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 ZFAND2AQ8N6M9 145 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.34□□□□□ -2.03
XRN1-209ENST00000472625 C2orf50Q96LR7 162 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 PAXXQ9BUH6 204 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 AGPAT4-IT1Q9H0P7 198 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 GTSF1LQ9H1H1 148 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 OTORQ9NRC9 128 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 NAGKQ9UJ70 344 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 PAM16Q9Y3D7 125 aa2.34□□□□□ -2.03
XRN1-209ENST00000472625 LSM5Q9Y4Y9 91 aaKnown RBP2.34□□□□□ -2.03
XRN1-209ENST00000472625 FAT3Q8TDW7 4589 aa2.34□□□□□ -2.04
XRN1-209ENST00000472625 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 IGKV2-40A0A087WW87 121 aaPredicted RBP2.33□□□□□ -2.04
XRN1-209ENST00000472625 TRAV8-1A0A0A6YYK1 113 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 LRCOL1A6NCL2 159 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 A8MWV9 139 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 USP17L23D6RBM5 183 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 TAAR5O14804 337 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 CCNKO75909 580 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 IGKV2D-40P01614 121 aaPredicted RBP2.33□□□□□ -2.04
XRN1-209ENST00000472625 SNRPCP09234 159 aaKnown RBP2.33□□□□□ -2.04
XRN1-209ENST00000472625 OR10J4P0C629 311 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 PYYP10082 97 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 GATA1P15976 413 aaPredicted RBP2.33□□□□□ -2.04
XRN1-209ENST00000472625 ERCC8Q13216 396 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 ZNF876PQ49A33 203 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 FFAR4Q5NUL3 377 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 MUC21Q5SSG8 566 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 MZT2BQ6NZ67 158 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 ZFP2Q6ZN57 461 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 Q6ZSA8 131 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 Q75L30 129 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 KRTAP7-1Q8IUC3 87 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 EXOC3-AS1Q8N2X6 119 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 TMEM252Q8N6L7 170 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 Q8N976 141 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 HSD17B11Q8NBQ5 300 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 OR5C1Q8NGR4 320 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 ASB13Q8WXK3 278 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 PTH2Q96A98 100 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 CCDC32Q9BV29 185 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 SLC25A2Q9BXI2 301 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 Q9HAA7 133 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 NUDT15Q9NV35 164 aa2.33□□□□□ -2.04
XRN1-209ENST00000472625 A0A087WX48 190 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 IGHV3-16A0A0C4DH30 117 aa2.32□□□□□ -2.04
XRN1-209ENST00000472625 FAM240BA0A1B0GVZ2 78 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms