RNA–Protein interactions for RNA: ENST00000472564.1

LAMP1-203, Transcript of lysosomal associated membrane protein 1, humanhuman

TSL 2

Gene LAMP1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-203ENST00000472564 GAGE12GP0CL81 117 aa13.4□□□□□ -0.26
LAMP1-203ENST00000472564 GAGE12IP0CL82 117 aa13.4□□□□□ -0.26
LAMP1-203ENST00000472564 PLXNB1O43157 2135 aa13.4□□□□□ -0.26
LAMP1-203ENST00000472564 MED12LQ86YW9 2145 aa13.4□□□□□ -0.26
LAMP1-203ENST00000472564 RNASE13Q5GAN3 156 aaKnown RBP13.4□□□□□ -0.26
LAMP1-203ENST00000472564 ZNF48Q96MX3 618 aaPredicted RBP13.4□□□□□ -0.26
LAMP1-203ENST00000472564 TEX22C9J3V5 150 aa13.39□□□□□ -0.27
LAMP1-203ENST00000472564 PLA2G5P39877 138 aa13.39□□□□□ -0.27
LAMP1-203ENST00000472564 EDA2RQ9HAV5 297 aa13.39□□□□□ -0.27
LAMP1-203ENST00000472564 SCRT2Q9NQ03 307 aa13.39□□□□□ -0.27
LAMP1-203ENST00000472564 BRWD1-AS2P59051 145 aa13.38□□□□□ -0.27
LAMP1-203ENST00000472564 ZNF295-AS1Q8N0V1 137 aa13.38□□□□□ -0.27
LAMP1-203ENST00000472564 NACAE9PAV3 2078 aa13.38□□□□□ -0.27
LAMP1-203ENST00000472564 RNF114Q9Y508 228 aa13.38□□□□□ -0.27
LAMP1-203ENST00000472564 RPL39LQ96EH5 51 aaKnown RBP13.38□□□□□ -0.27
LAMP1-203ENST00000472564 J3QLI3 93 aa13.38□□□□□ -0.27
LAMP1-203ENST00000472564 RHOHQ15669 191 aa13.38□□□□□ -0.27
LAMP1-203ENST00000472564 GAGE6Q13070 117 aa13.37□□□□□ -0.27
LAMP1-203ENST00000472564 FOXI2Q6ZQN5 318 aa13.37□□□□□ -0.27
LAMP1-203ENST00000472564 ZNF503Q96F45 646 aa13.37□□□□□ -0.27
LAMP1-203ENST00000472564 Q8N9W7 124 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 WDR87Q6ZQQ6 2873 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 PRAC2D3DTV9 90 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 IGHV4-59P01825 116 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 WI2-2373I1.2A0A1W2PRP0 233 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 CFC1BP0CG36 223 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 CFC1P0CG37 223 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 IGF2-ASQ6U949 168 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 TTTY13Q9BZ97 58 aa13.36□□□□□ -0.27
LAMP1-203ENST00000472564 SOCS3O14543 225 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 HERVK_113P63121 156 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 CRYGCP07315 174 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 NBL1P41271 181 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 DEFB112Q30KQ8 113 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 CARD19Q96LW7 228 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 Q96MF0 132 aa13.35□□□□□ -0.27
LAMP1-203ENST00000472564 C2orf16Q68DN1 1984 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 HOXD3P31249 432 aaPredicted RBP13.34□□□□□ -0.27
LAMP1-203ENST00000472564 NTN5Q8WTR8 489 aaPredicted RBP13.34□□□□□ -0.27
LAMP1-203ENST00000472564 ZNF106Q9H2Y7 1883 aaKnown RBP13.34□□□□□ -0.27
LAMP1-203ENST00000472564 IGLL5B9A064 214 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 NXPH4O95158 308 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 BLCAPP62952 87 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 TEX48A0A1B0GUV7 120 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 CGB3P0DN86 165 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 CGB7P0DN87 165 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 BOD1L2Q8IYS8 172 aa13.34□□□□□ -0.27
LAMP1-203ENST00000472564 AJUBAQ96IF1 538 aa13.33□□□□□ -0.28
LAMP1-203ENST00000472564 IGHV4-61A0A0C4DH41 118 aa13.33□□□□□ -0.28
LAMP1-203ENST00000472564 C19orf71A6NCJ1 209 aa13.33□□□□□ -0.28
LAMP1-203ENST00000472564 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
LAMP1-203ENST00000472564 SH2D6Q7Z4S9 175 aa13.33□□□□□ -0.28
LAMP1-203ENST00000472564 NCKAP5O14513 1909 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 F5H768 121 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 FXYD2P54710 66 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 C16orf54Q6UWD8 224 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 OTOGLQ3ZCN5 2332 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 SPANXA1Q9NS26 97 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 SUMO4Q6EEV6 95 aa13.32□□□□□ -0.28
LAMP1-203ENST00000472564 Q8N7P7 452 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 RNASE8Q8TDE3 154 aaKnown RBP13.31□□□□□ -0.28
LAMP1-203ENST00000472564 TAX1BP3O14907 124 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 CTRLP40313 264 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 C9orf153Q5TBE3 101 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 OBSL1O75147 1896 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 DAD1P61803 113 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.31□□□□□ -0.28
LAMP1-203ENST00000472564 IGKV2-29A2NJV5 120 aaPredicted RBP13.31□□□□□ -0.28
LAMP1-203ENST00000472564 UTF1Q5T230 341 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 VPREB3Q9UKI3 123 aa13.31□□□□□ -0.28
LAMP1-203ENST00000472564 IGHV4-38-2P0DP08 117 aa13.3□□□□□ -0.28
LAMP1-203ENST00000472564 ZFP2Q6ZN57 461 aa13.3□□□□□ -0.28
LAMP1-203ENST00000472564 U3KQE9 123 aa13.3□□□□□ -0.28
LAMP1-203ENST00000472564 MYO9AB2RTY4 2548 aa13.3□□□□□ -0.28
LAMP1-203ENST00000472564 C2orf70A6NJV1 201 aa13.3□□□□□ -0.28
LAMP1-203ENST00000472564 IGLV2-8P01709 118 aa13.3□□□□□ -0.28
LAMP1-203ENST00000472564 PIEZO2Q9H5I5 2752 aa13.29□□□□□ -0.28
LAMP1-203ENST00000472564 TRAV13-2A0A0B4J235 113 aa13.29□□□□□ -0.28
LAMP1-203ENST00000472564 A0A0J9YXV3 536 aa13.29□□□□□ -0.28
LAMP1-203ENST00000472564 SORL1Q92673 2214 aa13.29□□□□□ -0.28
LAMP1-203ENST00000472564 TRBV6-1A0A0K0K1D8 114 aa13.29□□□□□ -0.28
LAMP1-203ENST00000472564 FANCD2OSQ96PS1 177 aa13.29□□□□□ -0.28
LAMP1-203ENST00000472564 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 Q9H8V8 135 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 A0A1B0GXF2 115 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 HIGD1BQ9P298 99 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 DENND4AQ7Z401 1863 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 C9orf47Q6ZRZ4 202 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 C5orf56Q8N8D9 126 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 IFITM1P13164 125 aa13.28□□□□□ -0.28
LAMP1-203ENST00000472564 ZNF561-AS1K7EIQ3 104 aa13.27□□□□□ -0.28
LAMP1-203ENST00000472564 LINC00322Q6ZN03 302 aaPredicted RBP13.27□□□□□ -0.28
LAMP1-203ENST00000472564 CCDC168Q8NDH2 2452 aa13.27□□□□□ -0.28
LAMP1-203ENST00000472564 LINC00574Q9H8X3 128 aa13.27□□□□□ -0.29
LAMP1-203ENST00000472564 ZFP36P26651 326 aaKnown RBP13.26□□□□□ -0.29
LAMP1-203ENST00000472564 NOP10Q9NPE3 64 aaKnown RBP13.26□□□□□ -0.29
LAMP1-203ENST00000472564 A4D1N5 150 aa13.26□□□□□ -0.29
LAMP1-203ENST00000472564 ODF1Q14990 250 aa13.26□□□□□ -0.29
LAMP1-203ENST00000472564 IGHV4-30-2A0A087WSY4 118 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms