RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 C1orf158Q8N1D5 194 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 EXOC3-AS1Q8N2X6 119 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 TMEM263Q8WUH6 116 aaKnown RBP4.08□□□□□ -1.76
VARS-222ENST00000470953 HIST1H2BAQ96A08 127 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 ODF3Q96PU9 254 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 C20orf144Q9BQM9 153 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 ATG101Q9BSB4 218 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
VARS-222ENST00000470953 ZNF586Q9NXT0 402 aa4.08□□□□□ -1.76
VARS-222ENST00000470953 TRAV12-3A0A0B4J271 114 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 C7orf71A4D174 169 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 PRAC2D3DTV9 90 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 NPIPB6E9PJ23 425 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 F5H768 121 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 CRXO43186 299 aaPredicted RBP4.07□□□□□ -1.76
VARS-222ENST00000470953 SCGB1D1O95968 90 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 GPX1P07203 203 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 GIPP09681 153 aaPredicted RBP4.07□□□□□ -1.76
VARS-222ENST00000470953 PPT1P50897 306 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 RANP62826 216 aaKnown RBP4.07□□□□□ -1.76
VARS-222ENST00000470953 ERCC8Q13216 396 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 ZNF493Q6ZR52 646 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 TMUB2Q71RG4 321 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 CBLN2Q8IUK8 224 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 ZFP82Q8N141 532 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 OR11H4Q8NGC9 324 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 RNF141Q8WVD5 230 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 VCX2Q9H322 139 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 Q9H3A6 140 aa4.07□□□□□ -1.76
VARS-222ENST00000470953 TIMM8BQ9Y5J9 83 aaPredicted RBP4.07□□□□□ -1.76
VARS-222ENST00000470953 TRGV2A0A075B6R0 118 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 TGIF2-C20orf24A0A0A6YYL0 155 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 NUDT3O95989 172 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 PRM2P04554 102 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 SLC25A5P05141 298 aaKnown RBP4.06□□□□□ -1.76
VARS-222ENST00000470953 ATP5G1P05496 136 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 CT45A10P0DMU9 189 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 RAB5AP20339 215 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 RNASE4P34096 147 aaKnown RBP4.06□□□□□ -1.76
VARS-222ENST00000470953 AKR1C3P42330 323 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 ATP5G3P48201 142 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 PTTG1IPP53801 180 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 UBE2V1Q13404 147 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 TMEM88Q6PEY1 159 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 C15orf53Q8NAA6 179 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 OR10G4Q8NGN3 311 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 OR10G9Q8NGN4 311 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 OR10G7Q8NGN6 311 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 OR2T35Q8NGX2 323 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 Q8TAT8 98 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 FXYD5Q96DB9 178 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 LINC00477Q96M19 166 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 PYGO2Q9BRQ0 406 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 NDFIP1Q9BT67 221 aa4.06□□□□□ -1.76
VARS-222ENST00000470953 SSBP4Q9BWG4 385 aaPredicted RBP4.06□□□□□ -1.76
VARS-222ENST00000470953 NOP10Q9NPE3 64 aaKnown RBP4.06□□□□□ -1.76
VARS-222ENST00000470953 TRGV1A0A0A0MS02 117 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 GAGE12BA1L429 117 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 F6UZH7 168 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 SMLR1H3BR10 107 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 K7EQM0 130 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 PPP1R2P9O14990 202 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 HMGB3O15347 200 aaKnown RBP4.05□□□□□ -1.76
VARS-222ENST00000470953 GAGE7O76087 117 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 NDUFB4O95168 129 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 GAGE12FP0CL80 117 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 GAGE12GP0CL81 117 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 GAGE12IP0CL82 117 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 ARL14EPLP0DKL9 152 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 ZNF138P52744 262 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 ZNF415Q09FC8 603 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 OR5I1Q13606 314 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 NHLRC2Q8NBF2 726 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 OR10D4PQ8NGN7 298 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 GNPNAT1Q96EK6 184 aaPredicted RBP4.05□□□□□ -1.76
VARS-222ENST00000470953 FAM167A-AS1Q96KT0 104 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 AQP10Q96PS8 301 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 PSMG3Q9BT73 122 aaPredicted RBP4.05□□□□□ -1.76
VARS-222ENST00000470953 WFDC1Q9HC57 220 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 OTORQ9NRC9 128 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 SPANXA1Q9NS26 97 aa4.05□□□□□ -1.76
VARS-222ENST00000470953 G3V3Q6 166 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 CXorf1O96002 111 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 AZU1P20160 251 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 ATP6V0CP27449 155 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 FAM3BP58499 235 aaPredicted RBP4.04□□□□□ -1.76
VARS-222ENST00000470953 RHEBQ15382 184 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 COX19Q49B96 90 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 OCIAD2Q56VL3 154 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 C9orf47Q6ZRZ4 202 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 GOLT1AQ6ZVE7 132 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 HIST3H2BBQ8N257 126 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 ZNF664Q8N3J9 261 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 OR2G3Q8NGZ4 309 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 SFRP2Q96HF1 295 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 VGLL1Q99990 258 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 AGPAT4-IT1Q9H0P7 198 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 SH3BGRL3Q9H299 93 aa4.04□□□□□ -1.76
VARS-222ENST00000470953 ZNF492Q9P255 531 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms