RNA–Protein interactions for RNA: ENST00000470399.1

TTC19-204, Transcript of tetratricopeptide repeat domain 19, humanhuman

TSL 5

Gene TTC19, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC19-204ENST00000470399 HMGB3O15347 200 aaKnown RBP16.24■□□□□ 0.19
TTC19-204ENST00000470399 PFDN1O60925 122 aa16.24■□□□□ 0.19
TTC19-204ENST00000470399 PQLC2Q6ZP29 291 aa16.24■□□□□ 0.19
TTC19-204ENST00000470399 RAB24Q969Q5 203 aa16.24■□□□□ 0.19
TTC19-204ENST00000470399 TRAV8-1A0A0A6YYK1 113 aa16.23■□□□□ 0.19
TTC19-204ENST00000470399 KRTAP29-1A8MX34 341 aaPredicted RBP16.23■□□□□ 0.19
TTC19-204ENST00000470399 STAG3L2P0CL84 134 aa16.23■□□□□ 0.19
TTC19-204ENST00000470399 STAG3L3P0CL85 134 aa16.23■□□□□ 0.19
TTC19-204ENST00000470399 ACTR3CQ9C0K3 210 aaPredicted RBP16.23■□□□□ 0.19
TTC19-204ENST00000470399 RPH3ALQ9UNE2 315 aa16.23■□□□□ 0.19
TTC19-204ENST00000470399 OR10J3Q5JRS4 329 aa16.22■□□□□ 0.19
TTC19-204ENST00000470399 AKR1C8PQ5T2L2 129 aa16.22■□□□□ 0.19
TTC19-204ENST00000470399 OTORQ9NRC9 128 aa16.22■□□□□ 0.19
TTC19-204ENST00000470399 TRAV8-6A0A0B4J262 113 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 TRAV21A0A0B4J279 112 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 PGPA6NDG6 321 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 FBLL1A6NHQ2 334 aaKnown RBP16.21■□□□□ 0.19
TTC19-204ENST00000470399 RS1O15537 224 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 ARL14EPLP0DKL9 152 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 CFAP126Q5VTH2 177 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 GOLT1AQ6ZVE7 132 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 LINC00528Q8N1L1 170 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 C11orf21Q9P2W6 132 aa16.21■□□□□ 0.19
TTC19-204ENST00000470399 PKHD1L1Q86WI1 4243 aa16.2■□□□□ 0.18
TTC19-204ENST00000470399 PFN1P07737 140 aaKnown RBP16.2■□□□□ 0.18
TTC19-204ENST00000470399 SEC11BP0C7V7 166 aa16.2■□□□□ 0.18
TTC19-204ENST00000470399 EIF5AP63241 154 aaKnown RBP16.2■□□□□ 0.18
TTC19-204ENST00000470399 ZNF726P1Q15940 193 aa16.2■□□□□ 0.18
TTC19-204ENST00000470399 LELP1Q5T871 98 aa16.2■□□□□ 0.18
TTC19-204ENST00000470399 IGHV3-73A0A0B4J1V6 119 aa16.19■□□□□ 0.18
TTC19-204ENST00000470399 GNG5P63218 68 aa16.19■□□□□ 0.18
TTC19-204ENST00000470399 ZFP69Q49AA0 526 aa16.19■□□□□ 0.18
TTC19-204ENST00000470399 STOML3Q8TAV4 291 aa16.19■□□□□ 0.18
TTC19-204ENST00000470399 SDF2L1Q9HCN8 221 aa16.19■□□□□ 0.18
TTC19-204ENST00000470399 CTXND1A0A1B0GTU2 59 aa16.18■□□□□ 0.18
TTC19-204ENST00000470399 TRBV6-4A0A1B0GX49 114 aa16.18■□□□□ 0.18
TTC19-204ENST00000470399 TPT1P13693 172 aaKnown RBP16.18■□□□□ 0.18
TTC19-204ENST00000470399 ZNF80P51504 273 aaPredicted RBP16.18■□□□□ 0.18
TTC19-204ENST00000470399 TREM1Q9NP99 234 aa16.18■□□□□ 0.18
TTC19-204ENST00000470399 CXorf1O96002 111 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 GCHFRP30047 84 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 LAGE3Q14657 143 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 RHOHQ15669 191 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 ZNF876PQ49A33 203 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 C9orf62Q8N4C0 152 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 SUN5Q8TC36 379 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 SGK494Q96LW2 274 aa16.17■□□□□ 0.18
TTC19-204ENST00000470399 LECT2O14960 151 aa16.16■□□□□ 0.18
TTC19-204ENST00000470399 PLA2G1BP04054 148 aaKnown RBP16.16■□□□□ 0.18
TTC19-204ENST00000470399 KRTAP10-4P60372 401 aaPredicted RBP16.16■□□□□ 0.18
TTC19-204ENST00000470399 C9orf85Q96MD7 179 aa16.16■□□□□ 0.18
TTC19-204ENST00000470399 GTSF1LQ9H1H1 148 aa16.16■□□□□ 0.18
TTC19-204ENST00000470399 TMEM75Q8N9X5 138 aa16.15■□□□□ 0.18
TTC19-204ENST00000470399 CMTM2Q8TAZ6 248 aa16.15■□□□□ 0.18
TTC19-204ENST00000470399 KCNS1Q96KK3 526 aa16.15■□□□□ 0.18
TTC19-204ENST00000470399 PRADC1Q9BSG0 188 aa16.15■□□□□ 0.18
TTC19-204ENST00000470399 PGPEP1LA6NFU8 196 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 UMAD1C9J7I0 102 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 LINC00694P0DN24 101 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 FHITP49789 147 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 LINC01620Q4KN68 170 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 ATP6V0E2Q8NHE4 81 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 TMEM167BQ9NRX6 74 aa16.14■□□□□ 0.17
TTC19-204ENST00000470399 UBR4Q5T4S7 5183 aa16.13■□□□□ 0.17
TTC19-204ENST00000470399 ZNF506Q5JVG8 444 aa16.13■□□□□ 0.17
TTC19-204ENST00000470399 ARL6IP6Q8N6S5 226 aa16.13■□□□□ 0.17
TTC19-204ENST00000470399 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.12■□□□□ 0.17
TTC19-204ENST00000470399 SLC51BQ86UW2 128 aa16.12■□□□□ 0.17
TTC19-204ENST00000470399 Q9UF83 564 aa16.12■□□□□ 0.17
TTC19-204ENST00000470399 BOLA1Q9Y3E2 137 aa16.12■□□□□ 0.17
TTC19-204ENST00000470399 MAP1LC3B2A6NCE7 125 aa16.11■□□□□ 0.17
TTC19-204ENST00000470399 RNASE3P12724 160 aaKnown RBP16.11■□□□□ 0.17
TTC19-204ENST00000470399 FGF8P55075 233 aaPredicted RBP16.11■□□□□ 0.17
TTC19-204ENST00000470399 FAM74A1Q5RGS3 127 aa16.11■□□□□ 0.17
TTC19-204ENST00000470399 SCXQ7RTU7 201 aa16.11■□□□□ 0.17
TTC19-204ENST00000470399 DAZ4Q86SG3 579 aaKnown RBP16.11■□□□□ 0.17
TTC19-204ENST00000470399 DEFB104AQ8WTQ1 72 aa16.11■□□□□ 0.17
TTC19-204ENST00000470399 TM2D2Q9BX73 214 aa16.11■□□□□ 0.17
TTC19-204ENST00000470399 MAP1LC3BQ9GZQ8 125 aa16.11■□□□□ 0.17
TTC19-204ENST00000470399 DAZ3Q9NR90 486 aaKnown RBP16.11■□□□□ 0.17
TTC19-204ENST00000470399 CIDEAO60543 219 aa16.1■□□□□ 0.17
TTC19-204ENST00000470399 FAM213BQ8TBF2 198 aa16.1■□□□□ 0.17
TTC19-204ENST00000470399 DNAJC30Q96LL9 226 aa16.1■□□□□ 0.17
TTC19-204ENST00000470399 NKX2-5P52952 324 aaPredicted RBP16.09■□□□□ 0.17
TTC19-204ENST00000470399 EIF5AL1Q6IS14 154 aaKnown RBP16.09■□□□□ 0.17
TTC19-204ENST00000470399 PTH2Q96A98 100 aa16.09■□□□□ 0.17
TTC19-204ENST00000470399 IGLV2-11P01706 119 aa16.08■□□□□ 0.16
TTC19-204ENST00000470399 MGST1P10620 155 aaKnown RBP16.08■□□□□ 0.16
TTC19-204ENST00000470399 MBD3L1Q8WWY6 194 aa16.08■□□□□ 0.16
TTC19-204ENST00000470399 BAALCQ8WXS3 180 aa16.08■□□□□ 0.16
TTC19-204ENST00000470399 A0A1W2PRE2 83 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 GAGE12JA6NER3 117 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 GGTLC3B5MD39 225 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 GCGP01275 180 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 SUMO1P63165 101 aaKnown RBP16.06■□□□□ 0.16
TTC19-204ENST00000470399 GAGE1Q13065 139 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 GAGE4Q13068 117 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 GAGE5Q13069 117 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 GAGE13Q4V321 117 aa16.06■□□□□ 0.16
TTC19-204ENST00000470399 SFT2D1Q8WV19 159 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms