RNA–Protein interactions for RNA: ENST00000469713.1

VPS8-220, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 668 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-220ENST00000469713 PYYP10082 97 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 S100PP25815 95 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 ETV6P41212 452 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 LSM3P62310 102 aaKnown RBP0.89□□□□□ -2.27
VPS8-220ENST00000469713 OCIAD2Q56VL3 154 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 MEIG1Q5JSS6 88 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 C5orf17Q8NAS9 161 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 LINC00052Q96N35 136 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 CIB3Q96Q77 187 aaPredicted RBP0.89□□□□□ -2.27
VPS8-220ENST00000469713 C12orf57Q99622 126 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 TMEM191AQ9H0A3 160 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 SCN3BQ9NY72 215 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 MPC1Q9Y5U8 109 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 PTPRDP23468 1912 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 WDR97A6NE52 1622 aa0.89□□□□□ -2.27
VPS8-220ENST00000469713 USP9YO00507 2555 aaPredicted RBP0.89□□□□□ -2.27
VPS8-220ENST00000469713 KDM6AO15550 1401 aaPredicted RBP0.89□□□□□ -2.27
VPS8-220ENST00000469713 MYH9P35579 1960 aaKnown RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 TRBV6-4A0A1B0GX49 114 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 M0R2P5 195 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 DNAL4O96015 105 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 RBP4P02753 201 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 TFF1P04155 84 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 HIST1H1DP16402 221 aaKnown RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 FAM74A1Q5RGS3 127 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 SCIMPQ6UWF3 145 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 C2orf82Q6UX34 121 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 CASC2Q6XLA1 102 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 Q6ZUT4 128 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 SNX29P2Q8IUI4 249 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 TCTEX1D1Q8N7M0 179 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 TMEM203Q969S6 136 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 SMIM7Q9BQ49 75 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 IGSF10Q6WRI0 2623 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 AHNAKQ09666 5890 aaKnown RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 LRP5O75197 1615 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 CASP8AP2Q9UKL3 1982 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 NBEAL2Q6ZNJ1 2754 aa0.88□□□□□ -2.27
VPS8-220ENST00000469713 HEATR1Q9H583 2144 aaKnown RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 RIMS1Q86UR5 1692 aaKnown RBP0.88□□□□□ -2.27
VPS8-220ENST00000469713 ADGRB1O14514 1584 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 ALPK3Q96L96 1907 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 LAMA2P24043 3122 aaKnown RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 CECR2Q9BXF3 1484 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 TMEM2Q9UHN6 1383 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 PNMA8CA0A1B0GUJ8 204 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 BBIP1A8MTZ0 92 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 F8W1H4 67 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 CORTO00230 105 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 SNAPC5O75971 98 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 GUCA1AP43080 201 aaPredicted RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 WHAMMP3Q1A5X7 153 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 ASB16-AS1Q495Z4 193 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 ATP11AUNQ6ZP68 121 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 SLC25A26Q70HW3 274 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 KCNRGQ8N5I3 272 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 C14orf144Q96I85 54 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 PSMG3Q9BT73 122 aaPredicted RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 PDCD10Q9BUL8 212 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 SEC11CQ9BY50 192 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 ORMDL1Q9P0S3 153 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 NOP16Q9Y3C1 178 aaKnown RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 NAV3Q8IVL0 2385 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 FLNAP21333 2647 aaKnown RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 UBR5O95071 2799 aaPredicted RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 MYOM3Q5VTT5 1437 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 SMG6Q86US8 1419 aaKnown RBP0.87□□□□□ -2.27
VPS8-220ENST00000469713 SPG11Q96JI7 2443 aa0.87□□□□□ -2.27
VPS8-220ENST00000469713 UHRF1BP1LA0JNW5 1464 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 ITPR1Q14643 2758 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 PLXNA2O75051 1894 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 MUC22E2RYF6 1773 aaPredicted RBP0.86□□□□□ -2.27
VPS8-220ENST00000469713 AKAP11Q9UKA4 1901 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 MAP1BP46821 2468 aaKnown RBP0.86□□□□□ -2.27
VPS8-220ENST00000469713 CUL7Q14999 1698 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 TRAV12-2A0A075B6T6 113 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 IFITM5A6NNB3 132 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 NUPR1O60356 82 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 KLF7O75840 302 aaPredicted RBP0.86□□□□□ -2.27
VPS8-220ENST00000469713 APODP05090 189 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 AKAIN1P0CW23 69 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 IL7P13232 177 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 ADCYAP1P18509 176 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 FGF7P21781 194 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 CSAG1Q6PB30 78 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 ATOH7Q8N100 152 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 ATP6V0E2Q8NHE4 81 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 PP6455Q8WZ26 134 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 LSM10Q969L4 123 aaKnown RBP0.86□□□□□ -2.27
VPS8-220ENST00000469713 AMELYQ99218 206 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 LIMD2Q9BT23 127 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 AGPAT4-IT1Q9H0P7 198 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 SAR1AQ9NR31 198 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 TAS2R8Q9NYW2 309 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 CCDC167Q9P0B6 97 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 KMT2CQ8NEZ4 4911 aaKnown RBP0.86□□□□□ -2.27
VPS8-220ENST00000469713 HIVEP3Q5T1R4 2406 aa0.86□□□□□ -2.27
VPS8-220ENST00000469713 MACF1Q9UPN3 7388 aaKnown RBP0.85□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms