RNA–Protein interactions for RNA: ENST00000469558.1

MCF2L-222, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-222ENST00000469558 FAM162BQ5T6X4 162 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 ALKAL2Q6UX46 152 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 UPK3BQ9BT76 320 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 HHLA3Q9XRX5 114 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 PKHD1P08F94 4074 aa8.03□□□□□ -1.12
MCF2L-222ENST00000469558 TRBV20OR9-2A0A075B6H5 130 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 LOC100131303A0A0U1RQF7 123 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 B4DEV8 164 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 C9JCJ5 164 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 M0R036 132 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 BCL2P10415 239 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 GATA1P15976 413 aaPredicted RBP8.02□□□□□ -1.13
MCF2L-222ENST00000469558 RPL35P42766 123 aaKnown RBP8.02□□□□□ -1.13
MCF2L-222ENST00000469558 UFSP1Q6NVU6 142 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 LYPD6BQ8NI32 183 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 SCRT2Q9NQ03 307 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 IL36BQ9NZH7 164 aa8.02□□□□□ -1.13
MCF2L-222ENST00000469558 MRPS16Q9Y3D3 137 aaKnown RBP8.02□□□□□ -1.13
MCF2L-222ENST00000469558 GRIFINA4D1Z8 144 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 H3BVH4 76 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 K7EQD1 137 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 ORM1P02763 201 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 S100A9P06702 114 aaKnown RBP8.01□□□□□ -1.13
MCF2L-222ENST00000469558 CCL18P55774 89 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 RPL19P84098 196 aaKnown RBP8.01□□□□□ -1.13
MCF2L-222ENST00000469558 MEF2BQ02080 365 aaPredicted RBP8.01□□□□□ -1.13
MCF2L-222ENST00000469558 Q6ZSN1 163 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 OR4C5Q8NGB2 326 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 JPT2Q9H910 190 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 ICOSQ9Y6W8 199 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 DNAH11Q96DT5 4516 aa8.01□□□□□ -1.13
MCF2L-222ENST00000469558 TRGV4A0A0C4DH28 118 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 NBDYA0A0U1RRE5 68 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 A0A1B0GVY2 172 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 ARMS2P0C7Q2 107 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 ASIPP42127 132 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 SLAQ13239 276 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 PIK3CD-AS1Q5SR53 167 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 BAGE2Q86Y30 109 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 TXNDC17Q9BRA2 123 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 PARLQ9H300 379 aa8□□□□□ -1.13
MCF2L-222ENST00000469558 TMSB15BA0A087X1C1 80 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 RAB19A4D1S5 217 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 GYPEP15421 78 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 CENPWQ5EE01 88 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 SLC25A29Q8N8R3 303 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 SAMD10Q9BYL1 202 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 Q9UF83 564 aa7.99□□□□□ -1.13
MCF2L-222ENST00000469558 IGHV3-73A0A0B4J1V6 119 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 C19orf71A6NCJ1 209 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 NXPH4O95158 308 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 CXCL1P09341 107 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 LINC00694P0DN24 101 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 MRPL23Q16540 153 aaKnown RBP7.98□□□□□ -1.13
MCF2L-222ENST00000469558 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 Q9H8V8 135 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 VAX2Q9UIW0 290 aa7.98□□□□□ -1.13
MCF2L-222ENST00000469558 TEX46H3BTG2 121 aa7.97□□□□□ -1.13
MCF2L-222ENST00000469558 PDE6DO43924 150 aa7.97□□□□□ -1.13
MCF2L-222ENST00000469558 S100A4P26447 101 aaKnown RBP7.97□□□□□ -1.13
MCF2L-222ENST00000469558 TRBV6-4A0A1B0GX49 114 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 SNAI2O43623 268 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 IFNA1P01562 189 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 CRYGDP07320 174 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 MED14OSP0DP75 135 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 PRR27Q6MZM9 219 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 ZFP2Q6ZN57 461 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 LINC00336Q6ZUF6 198 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 NEGR1Q7Z3B1 354 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 OR10AG1Q8NH19 301 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 SFRP2Q96HF1 295 aa7.96□□□□□ -1.14
MCF2L-222ENST00000469558 SSBP4Q9BWG4 385 aaPredicted RBP7.96□□□□□ -1.14
MCF2L-222ENST00000469558 DYNC1H1Q14204 4646 aaKnown RBP7.95□□□□□ -1.14
MCF2L-222ENST00000469558 A8MWV9 139 aa7.95□□□□□ -1.14
MCF2L-222ENST00000469558 CIDEAO60543 219 aa7.95□□□□□ -1.14
MCF2L-222ENST00000469558 SRIP30626 198 aa7.95□□□□□ -1.14
MCF2L-222ENST00000469558 BLOC1S1P78537 153 aa7.95□□□□□ -1.14
MCF2L-222ENST00000469558 WFDC10BQ8IUB3 73 aa7.95□□□□□ -1.14
MCF2L-222ENST00000469558 C14orf178Q8N769 122 aaPredicted RBP7.95□□□□□ -1.14
MCF2L-222ENST00000469558 MED9Q9NWA0 146 aa7.95□□□□□ -1.14
MCF2L-222ENST00000469558 PRSS29PA6NIE9 313 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 K7EN84 100 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 M0R381 172 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 IGLC6P0CF74 106 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 GZMBP10144 247 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 MGST1P10620 155 aaKnown RBP7.94□□□□□ -1.14
MCF2L-222ENST00000469558 TAGLN2P37802 199 aaKnown RBP7.94□□□□□ -1.14
MCF2L-222ENST00000469558 GNG4P50150 75 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 TIRAPP58753 221 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 RHOHQ15669 191 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 C1orf134Q5TEV5 83 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 SMIM12Q96EX1 92 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 KIAA1109Q2LD37 5005 aa7.94□□□□□ -1.14
MCF2L-222ENST00000469558 A0A087WWL8 130 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 MUC21A0A0G2JKD1 596 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 MUC21A0A140T8X8 626 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 A0A1W2PPQ1 181 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 RBFOX3A6NFN3 312 aa7.93□□□□□ -1.14
MCF2L-222ENST00000469558 OR5AL1P0C617 328 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms