RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 C9orf85Q96MD7 179 aa7.55□□□□□ -1.2
MSH5-213ENST00000468136 C20orf78Q9BR46 151 aa7.55□□□□□ -1.2
MSH5-213ENST00000468136 CSMD1Q96PZ7 3565 aa7.55□□□□□ -1.2
MSH5-213ENST00000468136 HECTD1Q9ULT8 2610 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 ANK3Q12955 4377 aaKnown RBP7.54□□□□□ -1.2
MSH5-213ENST00000468136 IGHV3-16A0A0C4DH30 117 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 C20orf202A1L168 122 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 TSTD3H0UI37 97 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 LEPROTL1O95214 131 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 SCGB1D1O95968 90 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 INSP01308 110 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 DEFB1P60022 68 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 SPINK13Q1W4C9 94 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 MUC21Q5SSG8 566 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 Q6ZWC4 215 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 STHQ8IWL8 128 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 MCRIP2Q9BUT9 160 aaKnown RBP7.54□□□□□ -1.2
MSH5-213ENST00000468136 MXRA5Q9NR99 2828 aa7.54□□□□□ -1.2
MSH5-213ENST00000468136 GCN1Q92616 2671 aaKnown RBP7.54□□□□□ -1.2
MSH5-213ENST00000468136 CRXO43186 299 aaPredicted RBP7.53□□□□□ -1.2
MSH5-213ENST00000468136 BTF3P20290 206 aaKnown RBP7.53□□□□□ -1.2
MSH5-213ENST00000468136 EVI2AP22794 236 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 PKIAP61925 76 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 RPL32P62910 135 aaKnown RBP7.53□□□□□ -1.2
MSH5-213ENST00000468136 BEAN1Q3B7T3 259 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 NSUN5P1Q3KNT7 163 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 MORN3Q6PF18 240 aaPredicted RBP7.53□□□□□ -1.2
MSH5-213ENST00000468136 SPXQ9BT56 116 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 C1QTNF4Q9BXJ3 329 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 MSRB1Q9NZV6 116 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 AKAP9Q99996 3911 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 CELSR1Q9NYQ6 3014 aa7.53□□□□□ -1.2
MSH5-213ENST00000468136 MTORP42345 2549 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 ZFHX3Q15911 3703 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 IGHV1-24A0A0C4DH33 117 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 KNCNA6PVL3 124 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 TCAPO15273 167 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 GNRH2O43555 120 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 TNFRSF6BO95407 300 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 ZNF415Q09FC8 603 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 ODF3L2Q3SX64 289 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 C9orf66Q5T8R8 295 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 PET117Q6UWS5 81 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 LINC00482Q8N8I6 264 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 Q8N8P6 123 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 URB1-AS1Q96HZ7 61 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 TMEM70Q9BUB7 260 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.21
MSH5-213ENST00000468136 MUC21A0A0G2JKD1 596 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 MUC21A0A140T8X8 626 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 CBY3A6NI87 242 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 NPYP01303 97 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 IGKV3-20P01619 116 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 HBDP02042 147 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 KRTDAPP60985 99 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 SPATA12Q7Z6I5 190 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 TRPT1Q86TN4 253 aaKnown RBP7.51□□□□□ -1.21
MSH5-213ENST00000468136 Q8N1Y9 231 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 FAM19A2Q8N3H0 131 aa7.51□□□□□ -1.21
MSH5-213ENST00000468136 TRAV12-2A0A075B6T6 113 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 A8MWV9 139 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 H7C1H1 209 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 C3orf79P0CE67 100 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 IFI27P40305 119 aaPredicted RBP7.5□□□□□ -1.21
MSH5-213ENST00000468136 SSTP61278 116 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 KIR3DS1Q14943 382 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 ORMDL2Q53FV1 153 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 NRACQ8N912 160 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 CITED1Q99966 193 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 EDA2RQ9HAV5 297 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 TIMM8BQ9Y5J9 83 aaPredicted RBP7.5□□□□□ -1.21
MSH5-213ENST00000468136 SELENOKQ9Y6D0 94 aa7.5□□□□□ -1.21
MSH5-213ENST00000468136 M0R2P5 195 aa7.49□□□□□ -1.21
MSH5-213ENST00000468136 RHODO00212 210 aa7.49□□□□□ -1.21
MSH5-213ENST00000468136 FCER1GP30273 86 aa7.49□□□□□ -1.21
MSH5-213ENST00000468136 Q6ZQT7 251 aa7.49□□□□□ -1.21
MSH5-213ENST00000468136 GOLT1BQ9Y3E0 138 aa7.49□□□□□ -1.21
MSH5-213ENST00000468136 KIF25-AS1Q9Y6Z4 181 aa7.49□□□□□ -1.21
MSH5-213ENST00000468136 TRBV6-5A0A0K0K1A5 114 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 LOC389332A0A1B0GUA5 103 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 RBMY1BA6NDE4 496 aaKnown RBP7.48□□□□□ -1.21
MSH5-213ENST00000468136 RBMY1EA6NEQ0 496 aaKnown RBP7.48□□□□□ -1.21
MSH5-213ENST00000468136 SYS1-DBNDD2H3BUS1 97 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 CIDEAO60543 219 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 ATP5LO75964 103 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 RBMY1DP0C7P1 496 aaKnown RBP7.48□□□□□ -1.21
MSH5-213ENST00000468136 SUMO2P61956 95 aaKnown RBP7.48□□□□□ -1.21
MSH5-213ENST00000468136 LAGE3Q14657 143 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 C14orf178Q8N769 122 aaPredicted RBP7.48□□□□□ -1.21
MSH5-213ENST00000468136 LINC01587Q99440 93 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 VAMP8Q9BV40 100 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
MSH5-213ENST00000468136 IGLV2-18A0A075B6J9 118 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 NCR2O95944 276 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 KRTAP10-3P60369 221 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 ZNF876PQ49A33 203 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 GTSCR1Q86UQ5 136 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 TMEM208Q9BTX3 173 aa7.47□□□□□ -1.21
MSH5-213ENST00000468136 ZNF747Q9BV97 191 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms