RNA–Protein interactions for RNA: ENST00000467563.3

CHRNA4-203, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 2,098 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-203ENST00000467563 EVI2AP22794 236 aa13.81□□□□□ -0.2
CHRNA4-203ENST00000467563 BEAN1Q3B7T3 259 aa13.81□□□□□ -0.2
CHRNA4-203ENST00000467563 RNF185Q96GF1 192 aa13.81□□□□□ -0.2
CHRNA4-203ENST00000467563 LINC00518Q8N0U6 118 aa13.81□□□□□ -0.2
CHRNA4-203ENST00000467563 PHLDA3Q9Y5J5 127 aa13.81□□□□□ -0.2
CHRNA4-203ENST00000467563 IGHV1OR15-1A0A075B7D0 117 aa13.8□□□□□ -0.2
CHRNA4-203ENST00000467563 D6R8Y8 96 aa13.8□□□□□ -0.2
CHRNA4-203ENST00000467563 M0R381 172 aa13.8□□□□□ -0.2
CHRNA4-203ENST00000467563 TMEM18Q96B42 140 aa13.8□□□□□ -0.2
CHRNA4-203ENST00000467563 CLUHP3Q96NS8 147 aa13.8□□□□□ -0.2
CHRNA4-203ENST00000467563 U3KQK5 164 aa13.8□□□□□ -0.2
CHRNA4-203ENST00000467563 RAB4AP20338 218 aa13.79□□□□□ -0.2
CHRNA4-203ENST00000467563 Q8N1Y9 231 aa13.79□□□□□ -0.2
CHRNA4-203ENST00000467563 C19orf73Q9NVV2 129 aa13.79□□□□□ -0.2
CHRNA4-203ENST00000467563 KRTAP24-1Q3LI83 254 aa13.79□□□□□ -0.2
CHRNA4-203ENST00000467563 STHQ8IWL8 128 aa13.79□□□□□ -0.2
CHRNA4-203ENST00000467563 URB1-AS1Q96HZ7 61 aa13.79□□□□□ -0.2
CHRNA4-203ENST00000467563 IGHV3-16A0A0C4DH30 117 aa13.78□□□□□ -0.2
CHRNA4-203ENST00000467563 TRPT1Q86TN4 253 aaKnown RBP13.78□□□□□ -0.2
CHRNA4-203ENST00000467563 WFDC10AQ9H1F0 79 aa13.78□□□□□ -0.2
CHRNA4-203ENST00000467563 MDFICQ9P1T7 246 aa13.78□□□□□ -0.2
CHRNA4-203ENST00000467563 SMKR1H3BMG3 65 aa13.78□□□□□ -0.2
CHRNA4-203ENST00000467563 NOTCH3Q9UM47 2321 aa13.78□□□□□ -0.2
CHRNA4-203ENST00000467563 MUC4Q99102 2169 aa13.77□□□□□ -0.21
CHRNA4-203ENST00000467563 CMC4P56277 68 aaPredicted RBP13.77□□□□□ -0.21
CHRNA4-203ENST00000467563 NIT1Q86X76 327 aa13.77□□□□□ -0.21
CHRNA4-203ENST00000467563 ORMDL3Q8N138 153 aa13.77□□□□□ -0.21
CHRNA4-203ENST00000467563 FAM110AQ9BQ89 295 aa13.77□□□□□ -0.21
CHRNA4-203ENST00000467563 GAS8-AS1O95177 125 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 NCR2O95944 276 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 TRRAPQ9Y4A5 3859 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 NXPH4O95158 308 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 CKS2P33552 79 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 PYY3Q5JQD4 70 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 RNASEKQ6P5S7 137 aaKnown RBP13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 SMIM15Q7Z3B0 74 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 C9orf85Q96MD7 179 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 PRELID3AQ96N28 172 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 C12orf57Q99622 126 aa13.76□□□□□ -0.21
CHRNA4-203ENST00000467563 FBN1P35555 2871 aaKnown RBP13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 SMIM6P0DI80 62 aa13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 SAMD10Q9BYL1 202 aa13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 MAST4O15021 2626 aa13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 PMCHP20382 165 aa13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 FAM19A2Q8N3H0 131 aa13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 XCL2Q9UBD3 114 aa13.75□□□□□ -0.21
CHRNA4-203ENST00000467563 CBY3A6NI87 242 aa13.74□□□□□ -0.21
CHRNA4-203ENST00000467563 PRM2P04554 102 aa13.74□□□□□ -0.21
CHRNA4-203ENST00000467563 HTN1P15515 57 aa13.74□□□□□ -0.21
CHRNA4-203ENST00000467563 NPYP01303 97 aa13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 AMTP48728 403 aa13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 INSL3P51460 131 aa13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 INSP01308 110 aa13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 C9orf66Q5T8R8 295 aa13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 C14orf178Q8N769 122 aaPredicted RBP13.73□□□□□ -0.21
CHRNA4-203ENST00000467563 TRGV11A0A075B6L2 103 aa13.72□□□□□ -0.21
CHRNA4-203ENST00000467563 HSBP1O75506 76 aa13.72□□□□□ -0.21
CHRNA4-203ENST00000467563 PPBPP02775 128 aa13.72□□□□□ -0.21
CHRNA4-203ENST00000467563 LINC00614P0C842 121 aa13.72□□□□□ -0.21
CHRNA4-203ENST00000467563 GATA1P15976 413 aaPredicted RBP13.72□□□□□ -0.21
CHRNA4-203ENST00000467563 TRAV26-2A0A0B4J265 109 aa13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 Q6ZWC4 215 aa13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 CHCHD1Q96BP2 118 aaKnown RBP13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 AP1S3Q96PC3 154 aa13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 LINC01587Q99440 93 aa13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 C20orf144Q9BQM9 153 aa13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 JPT2Q9H910 190 aa13.71□□□□□ -0.21
CHRNA4-203ENST00000467563 LOC389332A0A1B0GUA5 103 aa13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 NUTF2P61970 127 aaKnown RBP13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 DPH3P1Q9H4G8 78 aa13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 GIG44P09565 113 aaPredicted RBP13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 IFI27P40305 119 aaPredicted RBP13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 PMCHL1Q16048 86 aa13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 CDPF1Q6NVV7 123 aa13.7□□□□□ -0.22
CHRNA4-203ENST00000467563 C1orf158Q8N1D5 194 aa13.69□□□□□ -0.22
CHRNA4-203ENST00000467563 PRSS3P2Q8NHM4 247 aa13.69□□□□□ -0.22
CHRNA4-203ENST00000467563 LINC00467Q9BRT7 94 aa13.69□□□□□ -0.22
CHRNA4-203ENST00000467563 KIF25-AS1Q9Y6Z4 181 aa13.69□□□□□ -0.22
CHRNA4-203ENST00000467563 TNFRSF6BO95407 300 aa13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 RPL35AP18077 110 aaKnown RBP13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 DEFB125Q8N687 156 aa13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 WFDC9Q8NEX5 89 aa13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 LINC00315P59091 139 aa13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 JOSD1Q15040 202 aaPredicted RBP13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 NRACQ8N912 160 aa13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 LAMTOR2Q9Y2Q5 125 aa13.68□□□□□ -0.22
CHRNA4-203ENST00000467563 IGHV1-24A0A0C4DH33 117 aa13.67□□□□□ -0.22
CHRNA4-203ENST00000467563 ZNF747Q9BV97 191 aa13.67□□□□□ -0.22
CHRNA4-203ENST00000467563 MGPP08493 103 aa13.67□□□□□ -0.22
CHRNA4-203ENST00000467563 MRAP2Q96G30 205 aa13.67□□□□□ -0.22
CHRNA4-203ENST00000467563 AP5S1Q9NUS5 200 aa13.67□□□□□ -0.22
CHRNA4-203ENST00000467563 A0A087WWL8 130 aa13.66□□□□□ -0.22
CHRNA4-203ENST00000467563 ZNF876PQ49A33 203 aa13.66□□□□□ -0.22
CHRNA4-203ENST00000467563 FA2HQ7L5A8 372 aa13.66□□□□□ -0.22
CHRNA4-203ENST00000467563 SYT8Q8NBV8 401 aa13.66□□□□□ -0.22
CHRNA4-203ENST00000467563 TMEM208Q9BTX3 173 aa13.66□□□□□ -0.22
CHRNA4-203ENST00000467563 IGHV3OR16-12A0A075B7B8 117 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 IGLL1P15814 213 aa13.65□□□□□ -0.22
CHRNA4-203ENST00000467563 GTSCR1Q86UQ5 136 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms