RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 EML5Q05BV3 1969 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 FAM25AB3EWG3 89 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 FAM25CB3EWG5 89 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 FAM25GB3EWG6 89 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 PYYP10082 97 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 EFNA4P52798 201 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 SELENOWP63302 87 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 EMX2Q04743 252 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 ATOH7Q8N100 152 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 C1orf54Q8WWF1 131 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 PSMG3Q9BT73 122 aaPredicted RBP0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 NCOA3Q9Y6Q9 1424 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 PTPRMP28827 1452 aa0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 CDK12Q9NYV4 1490 aaPredicted RBP0.61□□□□□ -2.31
GTF3C3-209ENST00000466862 CASZ1Q86V15 1759 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 ROCK2O75116 1388 aaKnown RBP0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 TMEM2Q9UHN6 1383 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 FOCADQ5VW36 1801 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 KIF13AQ9H1H9 1805 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 TRAV2A0A0B4J234 112 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 CXorf51AA0A1B0GTR3 108 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 HIGD1CA8MV81 97 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 DLEU1O43261 78 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 SNRNP200O75643 2136 aaKnown RBP0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 GUCA1AP43080 201 aaPredicted RBP0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 KRTAP10-4P60372 401 aaPredicted RBP0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 LINC01545Q5VT33 79 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 SCIMPQ6UWF3 145 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 KCNRGQ8N5I3 272 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 TET1Q8NFU7 2136 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 VSTM2AQ8TAG5 236 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 PPDPFLQ8WWR9 84 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 DMAC1Q96GE9 116 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 PDCD10Q9BUL8 212 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 ATG5Q9H1Y0 275 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 MBD5Q9P267 1494 aa0.6□□□□□ -2.31
GTF3C3-209ENST00000466862 MED12Q93074 2177 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 TRBV10-1A0A0K0K1A3 114 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 NBDYA0A0U1RRE5 68 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 LOC100130705A0A1B0GUX0 176 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 LOC101927531A0A1B0GV80 90 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 LINC00587B1AMM8 73 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 CCKP06307 115 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 PIRTP0C851 137 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 SLC25A6P12236 298 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 LINC00575Q6W349 94 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 Q6ZQY7 126 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 Q86TA4 180 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 DPH3Q96FX2 82 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 TMEM242Q9NWH2 141 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 MRPL35Q9NZE8 188 aaKnown RBP0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 CCDC167Q9P0B6 97 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 NDUFA12Q9UI09 145 aa0.59□□□□□ -2.31
GTF3C3-209ENST00000466862 MYH13Q9UKX3 1938 aa0.59□□□□□ -2.32
GTF3C3-209ENST00000466862 TENM3Q9P273 2699 aa0.59□□□□□ -2.32
GTF3C3-209ENST00000466862 PLXNA2O75051 1894 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 NINQ8N4C6 2090 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 MYH6P13533 1939 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 TRAV12-2A0A075B6T6 113 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 TRBV30A0A0K0K1B3 111 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 SPAARA0A1B0GVQ0 90 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 FAM92AA1XBS5 289 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 CCDC179H3BU77 68 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 APODP05090 189 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 IL5P05113 134 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 HIST1H1DP16402 221 aaKnown RBP0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 FXYD3Q14802 87 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 SPCS2Q15005 226 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 MEIG1Q5JSS6 88 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 SPANXN1Q5VSR9 72 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 XAF1Q6GPH4 301 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 IFI27L1Q96BM0 104 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 LINC00208Q96KT6 92 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 CCL19Q99731 98 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 RREB1Q92766 1687 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 DLG5Q8TDM6 1919 aa0.58□□□□□ -2.32
GTF3C3-209ENST00000466862 SPEF2Q9C093 1822 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 BCL9LQ86UU0 1499 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 A0A1W2PPM0 123 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 FXYD1O00168 92 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 APOC1P02654 83 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 CAV3P56539 151 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 NPC2P61916 151 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 S100A7L2Q5SY68 101 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 OR2T2Q6IF00 324 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 SLC48A1Q6P1K1 146 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 DEFB132Q7Z7B7 95 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 Q8N6K4 173 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 C5orf56Q8N8D9 126 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 SPTSSAQ969W0 71 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 C2orf88Q9BSF0 95 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 SNRNP25Q9BV90 132 aaKnown RBP0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 SEC11CQ9BY50 192 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 NALCNQ8IZF0 1738 aa0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 MUC22E2RYF6 1773 aaPredicted RBP0.57□□□□□ -2.32
GTF3C3-209ENST00000466862 ZGRF1Q86YA3 2104 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 MYH7P12883 1935 aa0.56□□□□□ -2.32
GTF3C3-209ENST00000466862 AKAP11Q9UKA4 1901 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms