RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 FBN2P35556 2912 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 PSMG4Q5JS54 123 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 FAM74A4Q5TZK3 123 aa12.36□□□□□ -0.43
SLX4-202ENST00000466154 PSMG3-AS1Q96PY0 264 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 MXRA5Q9NR99 2828 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 A0A087WWL8 130 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 H3BUT2 72 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 BOD1L2Q8IYS8 172 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 DPF1Q92782 380 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 CCDC168Q8NDH2 2452 aa12.35□□□□□ -0.43
SLX4-202ENST00000466154 SRSF1Q07955 248 aaKnown RBP eCLIP12.34□□□□□ -0.43
SLX4-202ENST00000466154 OR1N2Q8NGR9 330 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 EPG5Q9HCE0 2579 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 DPM2O94777 84 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 CD7P09564 240 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 KLK9Q2XQG4 91 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 CST9LQ9H4G1 147 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 KLK9Q9UKQ9 250 aa12.34□□□□□ -0.43
SLX4-202ENST00000466154 SOCS3O14543 225 aa12.33□□□□□ -0.43
SLX4-202ENST00000466154 SYNJ2BPP57105 145 aa12.33□□□□□ -0.43
SLX4-202ENST00000466154 FAM159AQ6UWV7 190 aa12.33□□□□□ -0.43
SLX4-202ENST00000466154 SMPXQ9UHP9 88 aa12.33□□□□□ -0.43
SLX4-202ENST00000466154 RNF223E7ERA6 249 aa12.33□□□□□ -0.44
SLX4-202ENST00000466154 SCGB3A1Q96QR1 104 aa12.33□□□□□ -0.44
SLX4-202ENST00000466154 TEX15Q9BXT5 2789 aa12.33□□□□□ -0.44
SLX4-202ENST00000466154 SAP30O75446 220 aa12.33□□□□□ -0.44
SLX4-202ENST00000466154 OCIAD2Q56VL3 154 aa12.33□□□□□ -0.44
SLX4-202ENST00000466154 IGLV2-18A0A075B6J9 118 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 CLUHP3Q96NS8 147 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 SMIM2Q9BVW6 85 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.32□□□□□ -0.44
SLX4-202ENST00000466154 SUMO2P61956 95 aaKnown RBP12.32□□□□□ -0.44
SLX4-202ENST00000466154 KHDC1LQ5JSQ8 128 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 DPH3P1Q9H4G8 78 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 BEX4Q9NWD9 120 aaPredicted RBP12.32□□□□□ -0.44
SLX4-202ENST00000466154 A6NDN8 102 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 ATP5LO75964 103 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 CRIP2P52943 208 aaPredicted RBP12.32□□□□□ -0.44
SLX4-202ENST00000466154 EMP1P54849 157 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 RASL10AQ92737 203 aa12.32□□□□□ -0.44
SLX4-202ENST00000466154 HHLA3Q9XRX5 114 aa12.31□□□□□ -0.44
SLX4-202ENST00000466154 GAGE10A6NGK3 116 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 IGLV1-40P01703 118 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 ID1P41134 155 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 K7ERJ3 54 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 HSD52Q0P140 79 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 WNK1Q9H4A3 2382 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
SLX4-202ENST00000466154 DEFB136Q30KP8 78 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 OR9G4Q8NGQ1 327 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 CSTL1Q9H114 145 aa12.3□□□□□ -0.44
SLX4-202ENST00000466154 SEC11AP67812 179 aa12.29□□□□□ -0.44
SLX4-202ENST00000466154 LENEPQ9Y5L5 61 aa12.29□□□□□ -0.44
SLX4-202ENST00000466154 SPINK13Q1W4C9 94 aa12.29□□□□□ -0.44
SLX4-202ENST00000466154 H3BUA1 57 aa12.28□□□□□ -0.44
SLX4-202ENST00000466154 LINC01356Q8N9X3 169 aa12.28□□□□□ -0.44
SLX4-202ENST00000466154 MRAP2Q96G30 205 aa12.28□□□□□ -0.44
SLX4-202ENST00000466154 DUX3Q96PT4 197 aa12.28□□□□□ -0.44
SLX4-202ENST00000466154 ADAMTSL5Q6ZMM2 481 aa12.28□□□□□ -0.44
SLX4-202ENST00000466154 CHAC1Q9BUX1 264 aa12.28□□□□□ -0.44
SLX4-202ENST00000466154 FXYD2P54710 66 aa12.27□□□□□ -0.44
SLX4-202ENST00000466154 ATP6V0BQ99437 205 aa12.27□□□□□ -0.44
SLX4-202ENST00000466154 NHP2Q9NX24 153 aaKnown RBP12.27□□□□□ -0.44
SLX4-202ENST00000466154 MUC4Q99102 2169 aa12.27□□□□□ -0.45
SLX4-202ENST00000466154 COX6B1P14854 86 aa12.27□□□□□ -0.45
SLX4-202ENST00000466154 C2orf66Q6UXQ4 117 aa12.27□□□□□ -0.45
SLX4-202ENST00000466154 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.45
SLX4-202ENST00000466154 JMJD8Q96S16 334 aa12.27□□□□□ -0.45
SLX4-202ENST00000466154 TRBV25-1A0A075B6N4 114 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 ZNF256Q9Y2P7 627 aaPredicted RBP12.26□□□□□ -0.45
SLX4-202ENST00000466154 PSMB8P28062 276 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 IGHV4-4A0A075B6R2 117 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 CIDEAO60543 219 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 SCGB2A2Q13296 93 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 DCANP1Q8TF63 244 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 MDFICQ9P1T7 246 aa12.26□□□□□ -0.45
SLX4-202ENST00000466154 CHTOPQ9Y3Y2 248 aaKnown RBP12.26□□□□□ -0.45
SLX4-202ENST00000466154 A0A087WX48 190 aa12.25□□□□□ -0.45
SLX4-202ENST00000466154 GAGE12BA1L429 117 aa12.25□□□□□ -0.45
SLX4-202ENST00000466154 KRTAP10-9P60411 292 aa12.25□□□□□ -0.45
SLX4-202ENST00000466154 SNRPD3P62318 126 aaKnown RBP12.25□□□□□ -0.45
SLX4-202ENST00000466154 ZNF56Q15929 161 aa12.25□□□□□ -0.45
SLX4-202ENST00000466154 ORMDL2Q53FV1 153 aa12.25□□□□□ -0.45
SLX4-202ENST00000466154 IGHV4OR15-8A0A075B7B6 117 aa12.24□□□□□ -0.45
SLX4-202ENST00000466154 A0A087WW49 117 aa12.24□□□□□ -0.45
SLX4-202ENST00000466154 HOXA3O43365 443 aaPredicted RBP12.24□□□□□ -0.45
SLX4-202ENST00000466154 C18orf65Q6ZTR6 163 aa12.24□□□□□ -0.45
SLX4-202ENST00000466154 IGHV3-73A0A0B4J1V6 119 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 K7ERU9 68 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 DUSP14O95147 198 aaKnown RBP12.23□□□□□ -0.45
SLX4-202ENST00000466154 PRM2P04554 102 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 RPL39P62891 51 aaKnown RBP12.23□□□□□ -0.45
SLX4-202ENST00000466154 CFHR3Q02985 330 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 HIST1H4GQ99525 98 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 C9orf118A6NHY6 69 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 ZMAT4Q9H898 229 aa12.23□□□□□ -0.45
SLX4-202ENST00000466154 PRRC2AP48634 2157 aaKnown RBP12.23□□□□□ -0.45
SLX4-202ENST00000466154 LINC01546A6NGU7 62 aa12.22□□□□□ -0.45
SLX4-202ENST00000466154 H3BRM9 83 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms