RNA–Protein interactions for RNA: ENST00000465941.1

HOXA9-203, Transcript of homeobox A9, humanhuman

TSL 1 (best)

Gene HOXA9, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-203ENST00000465941 K7EN84 100 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 RPL19P84098 196 aaKnown RBP12.9□□□□□ -0.34
HOXA9-203ENST00000465941 SRSF3P84103 164 aaKnown RBP12.9□□□□□ -0.34
HOXA9-203ENST00000465941 CLLU1Q5K131 121 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 POM121L12Q8N7R1 296 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 SMIM7Q9BQ49 75 aa12.9□□□□□ -0.34
HOXA9-203ENST00000465941 DYNC2H1Q8NCM8 4307 aaKnown RBP12.89□□□□□ -0.35
HOXA9-203ENST00000465941 IGHV3-53P01767 116 aa12.89□□□□□ -0.35
HOXA9-203ENST00000465941 MED14OSP0DP75 135 aa12.89□□□□□ -0.35
HOXA9-203ENST00000465941 C15orf53Q8NAA6 179 aa12.89□□□□□ -0.35
HOXA9-203ENST00000465941 TRAV26-1A0A087WT03 109 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 ZNF727A8MUV8 499 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 H3BNG1 76 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 P01737 135 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 SLAQ13239 276 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 FHL2Q14192 279 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 FAM74A3Q4VXF1 159 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 ZNF479Q96JC4 524 aa12.88□□□□□ -0.35
HOXA9-203ENST00000465941 RS1O15537 224 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 CIDEAO60543 219 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
HOXA9-203ENST00000465941 NUDT10Q8NFP7 164 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 OR2D3Q8NGH3 330 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 LINC00476Q8WZB0 136 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 NUDT11Q96G61 164 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
HOXA9-203ENST00000465941 HHLA3Q9XRX5 114 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 PHLDA3Q9Y5J5 127 aa12.87□□□□□ -0.35
HOXA9-203ENST00000465941 OR5AL1P0C617 328 aa12.86□□□□□ -0.35
HOXA9-203ENST00000465941 CFAP126Q5VTH2 177 aa12.86□□□□□ -0.35
HOXA9-203ENST00000465941 DMRTA1Q5VZB9 504 aa12.86□□□□□ -0.35
HOXA9-203ENST00000465941 LINC01551Q86U37 167 aa12.86□□□□□ -0.35
HOXA9-203ENST00000465941 SYT8Q8NBV8 401 aa12.86□□□□□ -0.35
HOXA9-203ENST00000465941 PRO0255Q9UI72 69 aa12.86□□□□□ -0.35
HOXA9-203ENST00000465941 TRGV4A0A0C4DH28 118 aa12.85□□□□□ -0.35
HOXA9-203ENST00000465941 A0A0J9YY99 117 aa12.85□□□□□ -0.35
HOXA9-203ENST00000465941 XKRY2A2RUG3 117 aa12.85□□□□□ -0.35
HOXA9-203ENST00000465941 A8MWV9 139 aa12.85□□□□□ -0.35
HOXA9-203ENST00000465941 SNAI2O43623 268 aa12.85□□□□□ -0.35
HOXA9-203ENST00000465941 VSIG2Q96IQ7 327 aa12.85□□□□□ -0.35
HOXA9-203ENST00000465941 RNASE7Q9H1E1 156 aaKnown RBP12.85□□□□□ -0.35
HOXA9-203ENST00000465941 LY6G6CO95867 125 aa12.84□□□□□ -0.35
HOXA9-203ENST00000465941 CRYBA4P53673 196 aa12.84□□□□□ -0.35
HOXA9-203ENST00000465941 TMEM241Q24JQ0 296 aa12.84□□□□□ -0.35
HOXA9-203ENST00000465941 FAM231DQ6ZW35 169 aa12.84□□□□□ -0.35
HOXA9-203ENST00000465941 ZFP82Q8N141 532 aa12.84□□□□□ -0.35
HOXA9-203ENST00000465941 MUC4Q99102 2169 aa12.84□□□□□ -0.35
HOXA9-203ENST00000465941 PAX4O43316 350 aa12.83□□□□□ -0.36
HOXA9-203ENST00000465941 NXPH4O95158 308 aa12.83□□□□□ -0.36
HOXA9-203ENST00000465941 NUDT3O95989 172 aa12.83□□□□□ -0.36
HOXA9-203ENST00000465941 P0DMU3 169 aa12.83□□□□□ -0.36
HOXA9-203ENST00000465941 FAM231AP0DMU4 169 aa12.83□□□□□ -0.36
HOXA9-203ENST00000465941 FAM231CP0DMU5 169 aa12.83□□□□□ -0.36
HOXA9-203ENST00000465941 RPP21Q9H633 154 aaKnown RBP12.83□□□□□ -0.36
HOXA9-203ENST00000465941 PLECQ15149 4684 aaKnown RBP12.83□□□□□ -0.36
HOXA9-203ENST00000465941 M0R381 172 aa12.82□□□□□ -0.36
HOXA9-203ENST00000465941 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
HOXA9-203ENST00000465941 GZMBP10144 247 aa12.82□□□□□ -0.36
HOXA9-203ENST00000465941 SOHLH1Q5JUK2 328 aa12.82□□□□□ -0.36
HOXA9-203ENST00000465941 ZFP2Q6ZN57 461 aa12.82□□□□□ -0.36
HOXA9-203ENST00000465941 SFRP2Q96HF1 295 aa12.82□□□□□ -0.36
HOXA9-203ENST00000465941 GATA1P15976 413 aaPredicted RBP12.81□□□□□ -0.36
HOXA9-203ENST00000465941 ERVFC1-1P60608 527 aa12.81□□□□□ -0.36
HOXA9-203ENST00000465941 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
HOXA9-203ENST00000465941 OR10AG1Q8NH19 301 aa12.81□□□□□ -0.36
HOXA9-203ENST00000465941 NAT8Q9UHE5 227 aa12.81□□□□□ -0.36
HOXA9-203ENST00000465941 A0A1W2PPQ1 181 aa12.8□□□□□ -0.36
HOXA9-203ENST00000465941 F2Z2F3 143 aa12.8□□□□□ -0.36
HOXA9-203ENST00000465941 UFSP1Q6NVU6 142 aa12.8□□□□□ -0.36
HOXA9-203ENST00000465941 JPT2Q9H910 190 aa12.8□□□□□ -0.36
HOXA9-203ENST00000465941 KMT2CQ8NEZ4 4911 aaKnown RBP12.79□□□□□ -0.36
HOXA9-203ENST00000465941 GATCO43716 136 aaKnown RBP12.79□□□□□ -0.36
HOXA9-203ENST00000465941 RPL23P62829 140 aaKnown RBP12.79□□□□□ -0.36
HOXA9-203ENST00000465941 RNF212Q495C1 297 aa12.79□□□□□ -0.36
HOXA9-203ENST00000465941 SPANXN1Q5VSR9 72 aa12.79□□□□□ -0.36
HOXA9-203ENST00000465941 SAMD10Q9BYL1 202 aa12.79□□□□□ -0.36
HOXA9-203ENST00000465941 OSTCQ9NRP0 149 aa12.79□□□□□ -0.36
HOXA9-203ENST00000465941 A0A096LPF7 62 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 IGHV3-73A0A0B4J1V6 119 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 TRBV6-4A0A1B0GX49 114 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 RHODO00212 210 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 CRYGDP07320 174 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 CT83Q5H943 113 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 SLC25A29Q8N8R3 303 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 ISOC2Q96AB3 205 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 TPPP3Q9BW30 176 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 ICOSQ9Y6W8 199 aa12.78□□□□□ -0.36
HOXA9-203ENST00000465941 MUC21A0A0G2JKD1 596 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 MUC21A0A140T8X8 626 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 A8MWL6 223 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 CACNG7P62955 275 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 MRPL23Q16540 153 aaKnown RBP12.77□□□□□ -0.37
HOXA9-203ENST00000465941 WDR73Q6P4I2 378 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 LYZL1Q6UWQ5 148 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 LYSTQ99698 3801 aa12.77□□□□□ -0.37
HOXA9-203ENST00000465941 GYPEP15421 78 aa12.76□□□□□ -0.37
HOXA9-203ENST00000465941 CTRLP40313 264 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms