RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 C14orf178Q8N769 122 aaPredicted RBP14.98□□□□□ -0.01
SDF4-205ENST00000465727 PTH2Q96A98 100 aa14.98□□□□□ -0.01
SDF4-205ENST00000465727 IGLV4-69A0A075B6H9 119 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 IGHV3OR16-13A0A075B7E8 117 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 IGHV3-74A0A0B4J1X5 117 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 CRYGDP07320 174 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 POM121L12Q8N7R1 296 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 ITLN2Q8WWU7 325 aaPredicted RBP14.97□□□□□ -0.01
SDF4-205ENST00000465727 ARHGAP32A7KAX9 2087 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 WNK2Q9Y3S1 2297 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 IGHV3-30P01768 117 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 IGHV3-30-5P0DP03 117 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 SLC25A29Q8N8R3 303 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 KLHL30-AS1Q8NEE0 82 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 WFDC12Q8WWY7 111 aa14.97□□□□□ -0.01
SDF4-205ENST00000465727 C11orf86A6NJI1 115 aa14.96□□□□□ -0.01
SDF4-205ENST00000465727 ATP6V0E1O15342 81 aa14.96□□□□□ -0.01
SDF4-205ENST00000465727 MGPP08493 103 aa14.96□□□□□ -0.01
SDF4-205ENST00000465727 SFTA2Q6UW10 78 aa14.96□□□□□ -0.01
SDF4-205ENST00000465727 ZFAND2AQ8N6M9 145 aa14.96□□□□□ -0.01
SDF4-205ENST00000465727 CFC1BP0CG36 223 aa14.96□□□□□ -0.02
SDF4-205ENST00000465727 CFC1P0CG37 223 aa14.96□□□□□ -0.02
SDF4-205ENST00000465727 FOXC1Q12948 553 aa14.96□□□□□ -0.02
SDF4-205ENST00000465727 PMVKQ15126 192 aa14.96□□□□□ -0.02
SDF4-205ENST00000465727 TMEM141Q96I45 108 aa14.96□□□□□ -0.02
SDF4-205ENST00000465727 MAP1BP46821 2468 aaKnown RBP14.95□□□□□ -0.02
SDF4-205ENST00000465727 DUSP14O95147 198 aaKnown RBP14.95□□□□□ -0.02
SDF4-205ENST00000465727 GPHB5Q86YW7 130 aa14.95□□□□□ -0.02
SDF4-205ENST00000465727 OR10J6PQ8NGY7 276 aa14.95□□□□□ -0.02
SDF4-205ENST00000465727 PRO1854Q9UHT4 67 aa14.95□□□□□ -0.02
SDF4-205ENST00000465727 OVOL1O14753 267 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 PIEZO2Q9H5I5 2752 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 IGHV4OR15-8A0A075B7B6 117 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 A0A087WW49 117 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 IGHV3-49A0A0A0MS15 119 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 IGIPA6NJ69 53 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 ANKRD29Q8N6D5 301 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 Q8NA96 180 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 TIMM17AQ99595 171 aa14.94□□□□□ -0.02
SDF4-205ENST00000465727 CEP295Q9C0D2 2601 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 CHD8Q9HCK8 2581 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 ZFAND6Q6FIF0 208 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 APC2O95996 2303 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 NXPH4O95158 308 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 TSHBP01222 138 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 TP53TG1Q9Y2A0 90 aa14.93□□□□□ -0.02
SDF4-205ENST00000465727 ANXA2RQ3ZCQ2 193 aa14.92□□□□□ -0.02
SDF4-205ENST00000465727 LINC01560Q8TB33 94 aa14.92□□□□□ -0.02
SDF4-205ENST00000465727 ANAPC13Q9BS18 74 aa14.92□□□□□ -0.02
SDF4-205ENST00000465727 TRBV7-9A0A0J9YWB2 115 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 SCGB1C2P0DMR2 95 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 RNF183Q96D59 192 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 C20orf173Q96LM9 149 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 AKAP13Q12802 2813 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 MGAQ8IWI9 3026 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 IGF1P05019 195 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 APRG1Q8IVJ8 170 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 TEX29Q8N6K0 151 aa14.91□□□□□ -0.02
SDF4-205ENST00000465727 LY6HO94772 140 aa14.9□□□□□ -0.02
SDF4-205ENST00000465727 FAM19A4Q96LR4 140 aa14.9□□□□□ -0.02
SDF4-205ENST00000465727 ACACBO00763 2458 aa14.9□□□□□ -0.02
SDF4-205ENST00000465727 SLC25A20O43772 301 aa14.89□□□□□ -0.03
SDF4-205ENST00000465727 Q6ZS46 218 aa14.89□□□□□ -0.03
SDF4-205ENST00000465727 KIR2DL4Q99706 377 aa14.89□□□□□ -0.03
SDF4-205ENST00000465727 J3KRW8 73 aa14.89□□□□□ -0.03
SDF4-205ENST00000465727 RNASE3P12724 160 aaKnown RBP14.89□□□□□ -0.03
SDF4-205ENST00000465727 POLR2KP53803 58 aaKnown RBP14.89□□□□□ -0.03
SDF4-205ENST00000465727 LINC01548A6NM66 108 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 G3V318 75 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 VCYO14598 125 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 SRD5A1P18405 259 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 CITED1Q99966 193 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 SIRPDQ9H106 197 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 KIF25-AS1Q9Y6Z4 181 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 J3QQQ9 107 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 TSPEAR-AS2P59090 65 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 FBXL19-AS1Q494R0 122 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 ZNF876PQ49A33 203 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 TMEM170BQ5T4T1 132 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 AMELXQ99217 191 aa14.88□□□□□ -0.03
SDF4-205ENST00000465727 SOCS3O14543 225 aa14.87□□□□□ -0.03
SDF4-205ENST00000465727 LGALS3P17931 250 aaKnown RBP14.87□□□□□ -0.03
SDF4-205ENST00000465727 A0A0B4J2C4 111 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 FAM223BA6NKX1 122 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 SPRY2O43597 315 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 P0DMU3 169 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 FAM231AP0DMU4 169 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 FAM231CP0DMU5 169 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 UBE2E1P51965 193 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 LINC00315P59091 139 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 GAGE5Q13069 117 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 GAGE6Q13070 117 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 FAM223AQ8IWN6 122 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 LINC01600Q96MT4 127 aa14.86□□□□□ -0.03
SDF4-205ENST00000465727 EMP1P54849 157 aa14.85□□□□□ -0.03
SDF4-205ENST00000465727 RNASE4P34096 147 aaKnown RBP14.85□□□□□ -0.03
SDF4-205ENST00000465727 C9JAW5 83 aa14.84□□□□□ -0.03
SDF4-205ENST00000465727 GNRH2O43555 120 aa14.84□□□□□ -0.03
SDF4-205ENST00000465727 IGHV3-33P01772 117 aa14.84□□□□□ -0.03
SDF4-205ENST00000465727 ZNRF2Q8NHG8 242 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms