RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SCRT2Q9NQ03 307 aa14.19□□□□□ -0.14
SKA3-205ENST00000465471 PGPEP1LA6NFU8 196 aa14.18□□□□□ -0.14
SKA3-205ENST00000465471 C9JCJ5 164 aa14.18□□□□□ -0.14
SKA3-205ENST00000465471 S100A4P26447 101 aaKnown RBP14.18□□□□□ -0.14
SKA3-205ENST00000465471 PIK3CD-AS1Q5SR53 167 aa14.18□□□□□ -0.14
SKA3-205ENST00000465471 PRR27Q6MZM9 219 aa14.18□□□□□ -0.14
SKA3-205ENST00000465471 VSIG2Q96IQ7 327 aa14.18□□□□□ -0.14
SKA3-205ENST00000465471 PARLQ9H300 379 aa14.18□□□□□ -0.14
SKA3-205ENST00000465471 GRIFINA4D1Z8 144 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 C19orf71A6NCJ1 209 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 H3BVH4 76 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 SFTA3P0C7M3 94 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 P0DMU3 169 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 FAM231AP0DMU4 169 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 FAM231CP0DMU5 169 aa14.17□□□□□ -0.14
SKA3-205ENST00000465471 TMSB15BA0A087X1C1 80 aa14.16□□□□□ -0.14
SKA3-205ENST00000465471 A0A0J9YY99 117 aa14.16□□□□□ -0.14
SKA3-205ENST00000465471 ARMS2P0C7Q2 107 aa14.16□□□□□ -0.14
SKA3-205ENST00000465471 RPL19P84098 196 aaKnown RBP14.16□□□□□ -0.14
SKA3-205ENST00000465471 EIF5A2Q9GZV4 153 aaKnown RBP14.16□□□□□ -0.14
SKA3-205ENST00000465471 PRO0255Q9UI72 69 aa14.16□□□□□ -0.14
SKA3-205ENST00000465471 RS1O15537 224 aa14.15□□□□□ -0.14
SKA3-205ENST00000465471 MED14OSP0DP75 135 aa14.15□□□□□ -0.14
SKA3-205ENST00000465471 MGST1P10620 155 aaKnown RBP14.15□□□□□ -0.14
SKA3-205ENST00000465471 CRYBA4P53673 196 aa14.15□□□□□ -0.14
SKA3-205ENST00000465471 SLAQ13239 276 aa14.15□□□□□ -0.14
SKA3-205ENST00000465471 CFAP126Q5VTH2 177 aa14.15□□□□□ -0.14
SKA3-205ENST00000465471 OR4C5Q8NGB2 326 aa14.15□□□□□ -0.14
SKA3-205ENST00000465471 NUDT3O95989 172 aa14.14□□□□□ -0.15
SKA3-205ENST00000465471 HHLA3Q9XRX5 114 aa14.14□□□□□ -0.15
SKA3-205ENST00000465471 SRP19P09132 144 aaKnown RBP14.13□□□□□ -0.15
SKA3-205ENST00000465471 RNF212Q495C1 297 aa14.13□□□□□ -0.15
SKA3-205ENST00000465471 BIN3Q9NQY0 253 aa14.13□□□□□ -0.15
SKA3-205ENST00000465471 TRGV4A0A0C4DH28 118 aa14.12□□□□□ -0.15
SKA3-205ENST00000465471 K7EN84 100 aa14.12□□□□□ -0.15
SKA3-205ENST00000465471 PAX4O43316 350 aa14.12□□□□□ -0.15
SKA3-205ENST00000465471 CIDEAO60543 219 aa14.12□□□□□ -0.15
SKA3-205ENST00000465471 OCC1Q8TAD7 63 aa14.12□□□□□ -0.15
SKA3-205ENST00000465471 SSBP4Q9BWG4 385 aaPredicted RBP14.12□□□□□ -0.15
SKA3-205ENST00000465471 A0A096LPF7 62 aa14.11□□□□□ -0.15
SKA3-205ENST00000465471 SNAI2O43623 268 aa14.11□□□□□ -0.15
SKA3-205ENST00000465471 NXPH4O95158 308 aa14.11□□□□□ -0.15
SKA3-205ENST00000465471 GATA1P15976 413 aaPredicted RBP14.11□□□□□ -0.15
SKA3-205ENST00000465471 DMRTA1Q5VZB9 504 aa14.11□□□□□ -0.15
SKA3-205ENST00000465471 A8MWV9 139 aa14.1□□□□□ -0.15
SKA3-205ENST00000465471 OR5AL1P0C617 328 aa14.1□□□□□ -0.15
SKA3-205ENST00000465471 UFSP1Q6NVU6 142 aa14.1□□□□□ -0.15
SKA3-205ENST00000465471 SYT8Q8NBV8 401 aa14.1□□□□□ -0.15
SKA3-205ENST00000465471 DAZAP1Q96EP5 407 aaKnown RBP14.1□□□□□ -0.15
SKA3-205ENST00000465471 PHLDA3Q9Y5J5 127 aa14.1□□□□□ -0.15
SKA3-205ENST00000465471 LY96Q9Y6Y9 160 aa14.1□□□□□ -0.15
SKA3-205ENST00000465471 ZFP2Q6ZN57 461 aa14.09□□□□□ -0.15
SKA3-205ENST00000465471 ZFP82Q8N141 532 aa14.09□□□□□ -0.15
SKA3-205ENST00000465471 C9JQL5 133 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 P01737 135 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 IGLC6P0CF74 106 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 CEBPGP53567 150 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 FAM3BP58499 235 aaPredicted RBP14.08□□□□□ -0.16
SKA3-205ENST00000465471 RPS20P60866 119 aaKnown RBP14.08□□□□□ -0.16
SKA3-205ENST00000465471 SRSF3P84103 164 aaKnown RBP14.08□□□□□ -0.16
SKA3-205ENST00000465471 NUDT10Q8NFP7 164 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 OR2D3Q8NGH3 330 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 NUDT11Q96G61 164 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 SMIM7Q9BQ49 75 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 SMDT1Q9H4I9 107 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 JPT2Q9H910 190 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 ICOSQ9Y6W8 199 aa14.08□□□□□ -0.16
SKA3-205ENST00000465471 IFITM2Q01629 132 aa14.07□□□□□ -0.16
SKA3-205ENST00000465471 UBE2DNLQ8IWF7 75 aa14.07□□□□□ -0.16
SKA3-205ENST00000465471 OR10AG1Q8NH19 301 aa14.07□□□□□ -0.16
SKA3-205ENST00000465471 SFRP2Q96HF1 295 aa14.07□□□□□ -0.16
SKA3-205ENST00000465471 LINC00588Q9Y4M8 146 aa14.07□□□□□ -0.16
SKA3-205ENST00000465471 TRBV6-4A0A1B0GX49 114 aa14.06□□□□□ -0.16
SKA3-205ENST00000465471 K7EQD1 137 aa14.06□□□□□ -0.16
SKA3-205ENST00000465471 M0R381 172 aa14.06□□□□□ -0.16
SKA3-205ENST00000465471 CCL18P55774 89 aa14.06□□□□□ -0.16
SKA3-205ENST00000465471 SAMD10Q9BYL1 202 aa14.06□□□□□ -0.16
SKA3-205ENST00000465471 RNASE7Q9H1E1 156 aaKnown RBP14.06□□□□□ -0.16
SKA3-205ENST00000465471 ZNF727A8MUV8 499 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 GZMBP10144 247 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 PEA15Q15121 130 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 MRPL23Q16540 153 aaKnown RBP14.05□□□□□ -0.16
SKA3-205ENST00000465471 ESRGQ1W209 222 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 FAM231DQ6ZW35 169 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 LINC01551Q86U37 167 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 SLC25A29Q8N8R3 303 aa14.05□□□□□ -0.16
SKA3-205ENST00000465471 IGHV3-73A0A0B4J1V6 119 aa14.04□□□□□ -0.16
SKA3-205ENST00000465471 RHODO00212 210 aa14.04□□□□□ -0.16
SKA3-205ENST00000465471 CRYGDP07320 174 aa14.04□□□□□ -0.16
SKA3-205ENST00000465471 GYPEP15421 78 aa14.04□□□□□ -0.16
SKA3-205ENST00000465471 ZNRF2Q8NHG8 242 aa14.04□□□□□ -0.16
SKA3-205ENST00000465471 RPP21Q9H633 154 aaKnown RBP14.04□□□□□ -0.16
SKA3-205ENST00000465471 XKRY2A2RUG3 117 aa14.03□□□□□ -0.16
SKA3-205ENST00000465471 FAM74A3Q4VXF1 159 aa14.03□□□□□ -0.16
SKA3-205ENST00000465471 Q6ZSN1 163 aa14.03□□□□□ -0.16
SKA3-205ENST00000465471 FER1L6-AS1Q8NA97 138 aa14.03□□□□□ -0.16
SKA3-205ENST00000465471 UPK3BQ9BT76 320 aa14.03□□□□□ -0.16
SKA3-205ENST00000465471 LOC100131303A0A0U1RQF7 123 aa14.02□□□□□ -0.17
SKA3-205ENST00000465471 RAB14P61106 215 aa14.02□□□□□ -0.17
SKA3-205ENST00000465471 RHOHQ15669 191 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms