RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 OCC1Q8TAD7 63 aa9.42□□□□□ -0.9
TSPAN1-202ENST00000464786 PCNPQ8WW12 178 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-202ENST00000464786 PLECQ15149 4684 aaKnown RBP9.42□□□□□ -0.9
TSPAN1-202ENST00000464786 KMT2CQ8NEZ4 4911 aaKnown RBP9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 TRBV20OR9-2A0A075B6H5 130 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 TMSB15BA0A087X1C1 80 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 TRGV4A0A0C4DH28 118 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 GRIFINA4D1Z8 144 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 P01737 135 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 P0DMU3 169 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 FAM231AP0DMU4 169 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 FAM231CP0DMU5 169 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 ZNF575Q86XF7 245 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 SMIM7Q9BQ49 75 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 PRO0255Q9UI72 69 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 PHLDA3Q9Y5J5 127 aa9.41□□□□□ -0.9
TSPAN1-202ENST00000464786 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 PGPEP1LA6NFU8 196 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 ZNF727A8MUV8 499 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 A8MWV9 139 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 H3BVH4 76 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 PAX4O43316 350 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 IGHV3-53P01767 116 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 HOXA5P20719 270 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 FHL2Q14192 279 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 OR2D3Q8NGH3 330 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 LINC00476Q8WZB0 136 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 SCRT2Q9NQ03 307 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 HHLA3Q9XRX5 114 aa9.4□□□□□ -0.9
TSPAN1-202ENST00000464786 RS1O15537 224 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 LY6G6CO95867 125 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 NUDT3O95989 172 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 CLLU1Q5K131 121 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 ZFP82Q8N141 532 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 POM121L12Q8N7R1 296 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 ZNF479Q96JC4 524 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 SSBP4Q9BWG4 385 aaPredicted RBP9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 NACAE9PAV3 2078 aa9.39□□□□□ -0.91
TSPAN1-202ENST00000464786 OR5AL1P0C617 328 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 RPL19P84098 196 aaKnown RBP9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 TMEM241Q24JQ0 296 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 RNF212Q495C1 297 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 CFAP126Q5VTH2 177 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 DMRTA1Q5VZB9 504 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 ZFP2Q6ZN57 461 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 NUDT10Q8NFP7 164 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 NUDT11Q96G61 164 aa9.38□□□□□ -0.91
TSPAN1-202ENST00000464786 A0A0J9YY99 117 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 A0A1W2PPQ1 181 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 F2Z2F3 143 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 SNAI2O43623 268 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 SFTA3P0C7M3 94 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 CRYBA4P53673 196 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 FAM231DQ6ZW35 169 aa9.37□□□□□ -0.91
TSPAN1-202ENST00000464786 K7EN84 100 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 CCL18P55774 89 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 FAM3BP58499 235 aaPredicted RBP9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 IFITM2Q01629 132 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 MRPL23Q16540 153 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 SOHLH1Q5JUK2 328 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 SPANXN1Q5VSR9 72 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 VSIG2Q96IQ7 327 aa9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 RPP21Q9H633 154 aaKnown RBP9.36□□□□□ -0.91
TSPAN1-202ENST00000464786 C9JQL5 133 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 M0R381 172 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 RHODO00212 210 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 GATCO43716 136 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 GATA1P15976 413 aaPredicted RBP9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 CACNG7P62955 275 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 SRSF3P84103 164 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 WDR73Q6P4I2 378 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 SH2D6Q7Z4S9 175 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 LINC01551Q86U37 167 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 UBE2DNLQ8IWF7 75 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 FER1L6-AS1Q8NA97 138 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 LYSTQ99698 3801 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 RNASE7Q9H1E1 156 aaKnown RBP9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 NAT8Q9UHE5 227 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 ICOSQ9Y6W8 199 aa9.35□□□□□ -0.91
TSPAN1-202ENST00000464786 TRBV6-4A0A1B0GX49 114 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 A8MWL6 223 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 NXPH4O95158 308 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 IGLC6P0CF74 106 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 C15orf54Q8N8G6 183 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 PRADC1Q9BSG0 188 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 OSTCQ9NRP0 149 aa9.34□□□□□ -0.91
TSPAN1-202ENST00000464786 ALMS1Q8TCU4 4167 aa9.33□□□□□ -0.92
TSPAN1-202ENST00000464786 CT83Q5H943 113 aa9.33□□□□□ -0.92
TSPAN1-202ENST00000464786 OR10AG1Q8NH19 301 aa9.33□□□□□ -0.92
TSPAN1-202ENST00000464786 A0A096LPF7 62 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 GZMBP10144 247 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 GYPEP15421 78 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 RHOHQ15669 191 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 UFSP1Q6NVU6 142 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
TSPAN1-202ENST00000464786 SLC25A29Q8N8R3 303 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms