RNA–Protein interactions for RNA: ENST00000464525.5

POLR2J3-203, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 2

Gene POLR2J3, Length 2,456 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-203ENST00000464525 DUX3Q96PT4 197 aa14.75□□□□□ -0.05
POLR2J3-203ENST00000464525 NIPBLQ6KC79 2804 aaeCLIP14.75□□□□□ -0.05
POLR2J3-203ENST00000464525 ID1P41134 155 aa14.75□□□□□ -0.05
POLR2J3-203ENST00000464525 PPBPP02775 128 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 S100A4P26447 101 aaKnown RBP14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 PET117Q6UWS5 81 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 KLHDC1Q8N7A1 406 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 MAP1LC3AQ9H492 121 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 SLURP1P55000 103 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 TMEM86BQ8N661 226 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 MUC4Q99102 2169 aa14.74□□□□□ -0.05
POLR2J3-203ENST00000464525 C20orf202A1L168 122 aa14.73□□□□□ -0.05
POLR2J3-203ENST00000464525 WNK1Q9H4A3 2382 aa14.73□□□□□ -0.05
POLR2J3-203ENST00000464525 IGHV4-4A0A075B6R2 117 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 LINC01545Q5VT33 79 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 ADAMTSL5Q6ZMM2 481 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 Q6ZSV7 163 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 SMIM15Q7Z3B0 74 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 APRG1Q8IVJ8 170 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 Q8N2B8 174 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 HBDP02042 147 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 ASIPP42127 132 aa14.72□□□□□ -0.05
POLR2J3-203ENST00000464525 NUTF2P61970 127 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 TCTEX1D4Q5JR98 221 aa14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 OR2K2Q8NGT1 345 aa14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 TRAV12-3A0A0B4J271 114 aa14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 RNASE3P12724 160 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 HNRNPA3P51991 378 aaKnown RBP14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 RNF152Q8N8N0 203 aa14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 C18orf15Q96N68 181 aa14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 PHLDA3Q9Y5J5 127 aa14.71□□□□□ -0.05
POLR2J3-203ENST00000464525 TRAV12-2A0A075B6T6 113 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 KLLNB2CW77 178 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 K7EQG2 157 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 CACNG7P62955 275 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 KHDC1LQ5JSQ8 128 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 C14orf178Q8N769 122 aaPredicted RBP14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 NRACQ8N912 160 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 TSPOP30536 169 aa14.7□□□□□ -0.06
POLR2J3-203ENST00000464525 HIVEP1P15822 2718 aa14.69□□□□□ -0.06
POLR2J3-203ENST00000464525 LGALS9O00182 355 aa14.69□□□□□ -0.06
POLR2J3-203ENST00000464525 LEPP41159 167 aa14.69□□□□□ -0.06
POLR2J3-203ENST00000464525 SNRPD3P62318 126 aaKnown RBP14.68□□□□□ -0.06
POLR2J3-203ENST00000464525 LAMTOR2Q9Y2Q5 125 aa14.68□□□□□ -0.06
POLR2J3-203ENST00000464525 A0A0J9YX75 114 aa14.68□□□□□ -0.06
POLR2J3-203ENST00000464525 OR11H1Q8NG94 326 aa14.68□□□□□ -0.06
POLR2J3-203ENST00000464525 IGLV2-18A0A075B6J9 118 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 TRBV7-9A0A0J9YWB2 115 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 SCRT2Q9NQ03 307 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 TMEM160Q9NX00 188 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 INAFM1C9JVW0 142 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 TCTAP57738 103 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 IFI27L1Q96BM0 104 aa14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 NXT2Q9NPJ8 142 aaKnown RBP14.67□□□□□ -0.06
POLR2J3-203ENST00000464525 C11orf44Q8N8P7 122 aa14.66□□□□□ -0.06
POLR2J3-203ENST00000464525 RBX1P62877 108 aa14.66□□□□□ -0.06
POLR2J3-203ENST00000464525 FAM159AQ6UWV7 190 aa14.66□□□□□ -0.06
POLR2J3-203ENST00000464525 ZNF418Q8TF45 676 aaPredicted RBP14.66□□□□□ -0.06
POLR2J3-203ENST00000464525 ST20Q9HBF5 79 aa14.66□□□□□ -0.06
POLR2J3-203ENST00000464525 SPINK13Q1W4C9 94 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 SAMD13Q5VXD3 122 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 Q8N8P6 123 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 TMEM158Q8WZ71 300 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 JPT2Q9H910 190 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 GOLT1BQ9Y3E0 138 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 LINC01546A6NGU7 62 aa14.65□□□□□ -0.06
POLR2J3-203ENST00000464525 MGPP08493 103 aa14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 CD7P09564 240 aa14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 FCER1GP30273 86 aa14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 SCGB2A2Q13296 93 aa14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 RPL39LQ96EH5 51 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 RNASE1P07998 156 aaKnown RBP14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 HINT1P49773 126 aaPredicted RBP14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 STPG4Q8N801 248 aa14.64□□□□□ -0.07
POLR2J3-203ENST00000464525 C7orf71A4D174 169 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 HILS1P60008 231 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 DKK2Q9UBU2 259 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 LINC01619G3V211 115 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 KLHL30-AS1Q8NEE0 82 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 RASL10AQ92737 203 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 DPH3P1Q9H4G8 78 aa14.63□□□□□ -0.07
POLR2J3-203ENST00000464525 MRPL52Q86TS9 123 aaKnown RBP14.62□□□□□ -0.07
POLR2J3-203ENST00000464525 DLX4Q92988 240 aaPredicted RBP14.62□□□□□ -0.07
POLR2J3-203ENST00000464525 TMEM238C9JI98 176 aa14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 OR1N2Q8NGR9 330 aa14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 DPF1Q92782 380 aa14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 MDFICQ9P1T7 246 aa14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 FN1P02751 2386 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 KNCNA6PVL3 124 aa14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 MRAP2Q96G30 205 aa14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 MRPS16Q9Y3D3 137 aaKnown RBP14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 NSD1Q96L73 2696 aaPredicted RBP14.61□□□□□ -0.07
POLR2J3-203ENST00000464525 LGALS9BQ3B8N2 356 aa14.6□□□□□ -0.07
POLR2J3-203ENST00000464525 LGALS9CQ6DKI2 356 aa14.6□□□□□ -0.07
POLR2J3-203ENST00000464525 MED14OSP0DP75 135 aa14.6□□□□□ -0.07
POLR2J3-203ENST00000464525 C4orf3Q8WVX3 66 aa14.6□□□□□ -0.07
POLR2J3-203ENST00000464525 CDKN1BP46527 198 aa14.59□□□□□ -0.07
POLR2J3-203ENST00000464525 SLC25A34Q6PIV7 304 aa14.59□□□□□ -0.07
POLR2J3-203ENST00000464525 TMEM61Q8N0U2 210 aa14.59□□□□□ -0.07
POLR2J3-203ENST00000464525 OR9G4Q8NGQ1 327 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms