RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 FRYLO94915 3013 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 TRAV13-1A0A0B4J241 112 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 IGHV3-38A0A0C4DH36 116 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 H3BRM9 83 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 BLCAPP62952 87 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 CR1LQ2VPA4 569 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 STHQ8IWL8 128 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 RPL39LQ96EH5 51 aaKnown RBP7.08□□□□□ -1.28
HPS4-208ENST00000464362 TRGV1A0A0A0MS02 117 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 B4DSR2 109 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 DEFB125Q8N687 156 aa7.08□□□□□ -1.28
HPS4-208ENST00000464362 DUSP14O95147 198 aaKnown RBP7.07□□□□□ -1.28
HPS4-208ENST00000464362 TSPAN13O95857 204 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 CENPEQ02224 2701 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 IGHV1-69DA0A0B4J2H0 117 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 IGHV1-69P01742 117 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 Q8N7P7 452 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 EPG5Q9HCE0 2579 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 C9JAW5 83 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 XCL2Q9UBD3 114 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 IGLV11-55A0A075B6I3 123 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 TRBV7-9A0A0J9YWB2 115 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 HLA-DRB4P13762 266 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 DLX4Q92988 240 aaPredicted RBP7.07□□□□□ -1.28
HPS4-208ENST00000464362 KLF12Q9Y4X4 402 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 HLA-DRB4X5D2U9 266 aa7.07□□□□□ -1.28
HPS4-208ENST00000464362 A0A1W2PPM0 123 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 RNF223E7ERA6 249 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 F8VRH5 84 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 SH2D6Q7Z4S9 175 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 LRP4O75096 1905 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 TRBV25-1A0A075B6N4 114 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 PF4P02776 101 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 ZFP36P26651 326 aaKnown RBP7.06□□□□□ -1.28
HPS4-208ENST00000464362 KLHL30-AS1Q8NEE0 82 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 USMG5Q96IX5 58 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 PRRC2AP48634 2157 aaKnown RBP7.06□□□□□ -1.28
HPS4-208ENST00000464362 LINC01548A6NM66 108 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 FXYD2P54710 66 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 TCF15Q12870 199 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 NRGNQ92686 78 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 FANCD2OSQ96PS1 177 aa7.06□□□□□ -1.28
HPS4-208ENST00000464362 MSMBP08118 114 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 SCGB1A1P11684 91 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
HPS4-208ENST00000464362 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
HPS4-208ENST00000464362 Q8NA96 180 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 ZNF462Q96JM2 2506 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 TRGV11A0A075B6L2 103 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 FAM223BA6NKX1 122 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 K7EP34 96 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 BUB3O43684 328 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 RPL35AP18077 110 aaKnown RBP7.05□□□□□ -1.28
HPS4-208ENST00000464362 CFHR3Q02985 330 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 FAM223AQ8IWN6 122 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 TMEM101Q96IK0 257 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 CHCHD5Q9BSY4 110 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 C19orf71A6NCJ1 209 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 PRSS29PA6NIE9 313 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 Q8N9W7 124 aa7.05□□□□□ -1.28
HPS4-208ENST00000464362 GAGE5Q13069 117 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 GAGE6Q13070 117 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 OR11H6Q8NGC7 330 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 MBD6Q96DN6 1003 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 MAP1AP78559 2803 aaPredicted RBP7.04□□□□□ -1.28
HPS4-208ENST00000464362 CENPVL3A0A0U1RRI6 287 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 M0R2P5 195 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 CRYGCP07315 174 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 DEFB136Q30KP8 78 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 SCRT2Q9NQ03 307 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 YAE1D1Q9NRH1 226 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 TEX48A0A1B0GUV7 120 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 IGHV4-38-2P0DP08 117 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 C8orf31Q8N9H6 132 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 PEMTQ9UBM1 199 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 IGHV4-61A0A0C4DH41 118 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 MYMXA0A1B0GTQ4 84 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 LINC00310P59036 64 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 NSUN5P1Q3KNT7 163 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 LINC01559Q495D7 138 aa7.04□□□□□ -1.28
HPS4-208ENST00000464362 TRAV8-3A0A0A6YYJ7 113 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 A0A1B0GXF2 115 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 TIMM21Q9BVV7 248 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 HERV-K104P63124 156 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 TRBV12-3P01733 135 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 IGHV4-59P01825 116 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 C12orf74Q32Q52 190 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 TCTEX1D4Q5JR98 221 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 CEND1Q8N111 149 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 MLST8Q9BVC4 326 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 MGAQ8IWI9 3026 aa7.03□□□□□ -1.28
HPS4-208ENST00000464362 VWC2LB2RUY7 222 aa7.02□□□□□ -1.29
HPS4-208ENST00000464362 PMVKQ15126 192 aa7.02□□□□□ -1.29
HPS4-208ENST00000464362 LINC00158P58513 81 aa7.02□□□□□ -1.29
HPS4-208ENST00000464362 Q71RC1 249 aaPredicted RBP7.02□□□□□ -1.29
HPS4-208ENST00000464362 JPT2Q9H910 190 aa7.02□□□□□ -1.29
HPS4-208ENST00000464362 A0A087WX48 190 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms