RNA–Protein interactions for RNA: ENST00000463147.1

USH2A-203, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 618 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-203ENST00000463147 CTSDP07339 412 aaPredicted RBP1.82□□□□□ -2.12
USH2A-203ENST00000463147 SLC38A11Q08AI6 406 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 RRN3P1Q2M238 152 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 SPATA45Q537H7 98 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 RPL7L1Q6DKI1 246 aaKnown RBP1.82□□□□□ -2.12
USH2A-203ENST00000463147 Q6ZTI0 123 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 AAED1Q7RTV5 226 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 OR8I2Q8N0Y5 310 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 ST6GALNAC3Q8NDV1 305 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 OR5A1Q8NGJ0 315 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 EFCAB11Q9BUY7 163 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 PBOV1Q9GZY1 135 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 BANF2Q9H503 90 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 TMEM106BQ9NUM4 274 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 TRAPPC2LQ9UL33 140 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 NHSQ6T4R5 1651 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 LY75O60449 1722 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 BTAF1O14981 1849 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 PATJQ8NI35 1801 aa1.82□□□□□ -2.12
USH2A-203ENST00000463147 A0A0G2JMM0 328 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 A0A1W2PPB8 328 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 IGLC7A0M8Q6 106 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 MEIS3P1A6NDR6 274 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 KIR3DP1A8MWS1 328 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 ZNF736B4DX44 427 aaPredicted RBP1.81□□□□□ -2.12
USH2A-203ENST00000463147 J3QLW9 94 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 NAPSAO96009 420 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 CYB5AP00167 134 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 CD3DP04234 171 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 P0DMU3 169 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 FAM231AP0DMU4 169 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 FAM231CP0DMU5 169 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 IGLC2P0DOY2 106 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 IGLC3P0DOY3 106 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 GNG4P50150 75 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 HSD52Q0P140 79 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 INSL4Q14641 139 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 MSMO1Q15800 293 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 ADIRFQ15847 76 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 PMCHL1Q16048 86 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 NNATQ16517 81 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 MPV17LQ2QL34 196 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 TMEM128Q5BJH2 165 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 TMEM78Q5T7P6 136 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 GKN2Q86XP6 184 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 C10orf111Q8N326 155 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 C5orf17Q8NAS9 161 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 PPTC7Q8NI37 304 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 FAM213BQ8TBF2 198 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 KRTAP4-1Q9BYQ7 146 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 LINC00470Q9BZP3 86 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 JPT1Q9UK76 154 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 PARP14Q460N5 1801 aa1.81□□□□□ -2.12
USH2A-203ENST00000463147 ABCA3Q99758 1704 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 SBF2Q86WG5 1849 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 PDCD11Q14690 1871 aaKnown RBP1.8□□□□□ -2.12
USH2A-203ENST00000463147 IGKV1D-42A0A075B6H8 117 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 IGLV3-9A0A075B6K5 115 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 A0A1W2PRE2 83 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 ODAMA1E959 279 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 IBA57-AS1B1ANH7 110 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 H3BRN7 92 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 HYPMO75409 117 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 SFT2D2O95562 160 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 IGLC1P0CG04 106 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 FXYD2P54710 66 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 KRTDAPP60985 99 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 PSG9Q00887 426 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 TDRG1Q3Y452 100 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 CCSMST1Q4G0I0 132 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 TMEM155Q4W5P6 130 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 MRPL54Q6P161 138 aaKnown RBP1.8□□□□□ -2.12
USH2A-203ENST00000463147 LCN15Q6UWW0 184 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 Q6ZQT0 140 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 BAGE3Q86Y29 109 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 BAGE2Q86Y30 109 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 CLECL1Q8IZS7 167 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 DEFB106AQ8N104 65 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 TMEM86AQ8N2M4 240 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 OR2T10Q8NGZ9 312 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 ZNF418Q8TF45 676 aaPredicted RBP1.8□□□□□ -2.12
USH2A-203ENST00000463147 ZCCHC13Q8WW36 166 aaKnown RBP1.8□□□□□ -2.12
USH2A-203ENST00000463147 AQP3Q92482 292 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 TXNDC17Q9BRA2 123 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 SMIM3Q9BZL3 60 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 CST11Q9H112 138 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 LPAR5Q9H1C0 372 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 HSPB8Q9UJY1 196 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 A0A0G2JMZ2 1700 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 LRRC37A2A6NM11 1700 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 LRRC37AA6NMS7 1700 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 PHLPP1O60346 1717 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 SBF1O95248 1867 aa1.8□□□□□ -2.12
USH2A-203ENST00000463147 OR2T8A6NH00 312 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 LOC730098B7Z3J9 87 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 C17orf112F2Z3M2 114 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 LY6LH3BQJ8 138 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 J3QRE1 110 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 K7EP34 96 aa1.79□□□□□ -2.12
USH2A-203ENST00000463147 TMEM256-PLSCR3K7ERE1 68 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms