RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 CD28P10747 220 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 AMTNQ6UX39 209 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 OR2K2Q8NGT1 345 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 MAP1LC3CQ9BXW4 147 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 LAMTOR2Q9Y2Q5 125 aa7.55□□□□□ -1.2
MSH5-211ENST00000463144 TRAV9-2A0A087WT02 112 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 OR4C46A6NHA9 309 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 LEPP41159 167 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 SPINK13Q1W4C9 94 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 FAM159AQ6UWV7 190 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 TMEM61Q8N0U2 210 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 RAX2Q96IS3 184 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 PHLDA3Q9Y5J5 127 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 RNASE1P07998 156 aaKnown RBP7.54□□□□□ -1.2
MSH5-211ENST00000463144 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 PET117Q6UWS5 81 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 FOXI2Q6ZQN5 318 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 C14orf178Q8N769 122 aaPredicted RBP7.54□□□□□ -1.2
MSH5-211ENST00000463144 LINC01006Q8NI28 216 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 PEMTQ9UBM1 199 aa7.54□□□□□ -1.2
MSH5-211ENST00000463144 A0A1W2PRX2 142 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 KNCNA6PVL3 124 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 PRSS47A8MTI9 375 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 H0Y8G0 127 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 DUSP14O95147 198 aaKnown RBP7.53□□□□□ -1.2
MSH5-211ENST00000463144 NXPH4O95158 308 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 IGLL1P15814 213 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 DEFB131AP59861 70 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 ZNF124Q15973 351 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 ZNF705AQ6ZN79 300 aaPredicted RBP7.53□□□□□ -1.2
MSH5-211ENST00000463144 HBDP02042 147 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 CDKN1BP46527 198 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 DEFB114Q30KQ6 69 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 LINC01545Q5VT33 79 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 DEFB125Q8N687 156 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 CITED2Q99967 270 aaPredicted RBP7.53□□□□□ -1.2
MSH5-211ENST00000463144 PMCHL2Q9BQD1 86 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 C16orf95Q9H693 158 aa7.53□□□□□ -1.2
MSH5-211ENST00000463144 NXT2Q9NPJ8 142 aaKnown RBP7.53□□□□□ -1.2
MSH5-211ENST00000463144 EREGO14944 169 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 CD7P09564 240 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 FHL3Q13643 280 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 Q8N8P6 123 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 SNHG12Q9BXW3 62 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 DPH3P1Q9H4G8 78 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 KIF25-AS1Q9Y6Z4 181 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 TRAV2A0A0B4J234 112 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 hDV102S1A0JD36 115 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 RBMY1A1P0DJD3 496 aaKnown RBP7.52□□□□□ -1.21
MSH5-211ENST00000463144 RBMY1CP0DJD4 496 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 LINC00315P59091 139 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 RBMY1FQ15415 496 aaKnown RBP7.52□□□□□ -1.21
MSH5-211ENST00000463144 RASL10AQ92737 203 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 JPT2Q9H910 190 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
MSH5-211ENST00000463144 SETXQ7Z333 2677 aaKnown RBP7.51□□□□□ -1.21
MSH5-211ENST00000463144 IGHV3-16A0A0C4DH30 117 aa7.51□□□□□ -1.21
MSH5-211ENST00000463144 C20orf202A1L168 122 aa7.51□□□□□ -1.21
MSH5-211ENST00000463144 RBMY1BA6NDE4 496 aaKnown RBP7.51□□□□□ -1.21
MSH5-211ENST00000463144 RBMY1EA6NEQ0 496 aaKnown RBP7.51□□□□□ -1.21
MSH5-211ENST00000463144 A8MTW9 85 aa7.51□□□□□ -1.21
MSH5-211ENST00000463144 RBMY1DP0C7P1 496 aaKnown RBP7.51□□□□□ -1.21
MSH5-211ENST00000463144 CD300EQ496F6 205 aaPredicted RBP7.51□□□□□ -1.21
MSH5-211ENST00000463144 H3BMM0 161 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 CCL24O00175 119 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 HLA-DRB4P13762 266 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 FCER1GP30273 86 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 TSPOP30536 169 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 Q8N1Y9 231 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 POM121L12Q8N7R1 296 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 DYNLRB2Q8TF09 96 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 C9orf85Q96MD7 179 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 TMEM160Q9NX00 188 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 HLA-DRB4X5D2U9 266 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 IGHV1OR15-1A0A075B7D0 117 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 HILS1P60008 231 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 RPL39LQ96EH5 51 aaKnown RBP7.5□□□□□ -1.21
MSH5-211ENST00000463144 MAP6D1Q9H9H5 199 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 UQCR10Q9UDW1 63 aa7.5□□□□□ -1.21
MSH5-211ENST00000463144 ZNF256Q9Y2P7 627 aaPredicted RBP7.5□□□□□ -1.21
MSH5-211ENST00000463144 FLNBO75369 2602 aaKnown RBP7.49□□□□□ -1.21
MSH5-211ENST00000463144 TCAPO15273 167 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 LY6G6DO95868 133 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 MGPP08493 103 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 ZNF418Q8TF45 676 aaPredicted RBP7.49□□□□□ -1.21
MSH5-211ENST00000463144 TMEM158Q8WZ71 300 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 IFI27L1Q96BM0 104 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 AP1S3Q96PC3 154 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 C2orf88Q9BSF0 95 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 MTORP42345 2549 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 C18orf15Q96N68 181 aa7.49□□□□□ -1.21
MSH5-211ENST00000463144 TSSC4Q9Y5U2 329 aaPredicted RBP7.49□□□□□ -1.21
MSH5-211ENST00000463144 M0R143 59 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 LGALS9BQ3B8N2 356 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 LGALS9CQ6DKI2 356 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
MSH5-211ENST00000463144 OTOGQ6ZRI0 2925 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms