RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 F8W735 103 aaPredicted RBP5.88□□□□□ -1.47
USP4-207ENST00000462673 H0Y8G0 127 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 K7EQM0 130 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 CIDEAO60543 219 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 IL4P05112 153 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 RPL11P62913 178 aaKnown RBP5.88□□□□□ -1.47
USP4-207ENST00000462673 BEAN1Q3B7T3 259 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 TM4SF20Q53R12 229 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 DEFB121Q5J5C9 76 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 SAMD13Q5VXD3 122 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 C16orf54Q6UWD8 224 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 TMEM75Q8N9X5 138 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 BLNKQ8WV28 456 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 RNF125Q96EQ8 232 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 RHPN1-AS1Q9BWJ2 59 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 HIGD1AQ9Y241 93 aa5.88□□□□□ -1.47
USP4-207ENST00000462673 TMEM213A2RRL7 107 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 IGKV1-17P01599 117 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 NBEAP1P0C6P0 100 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 CT45A10P0DMU9 189 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 FGF6P10767 208 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 PLP1P60201 277 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 KIR3DS1Q14943 382 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 UNQ9165/PRO28630Q6UXU0 137 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 SPAG8Q99932 426 aaPredicted RBP5.87□□□□□ -1.47
USP4-207ENST00000462673 TMEM14CQ9P0S9 112 aa5.87□□□□□ -1.47
USP4-207ENST00000462673 A0A1W2PPM0 123 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 WI2-2373I1.2A0A1W2PRP0 233 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 H3BUT2 72 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 HBDP02042 147 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 FABP2P12104 132 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 LINC01559Q495D7 138 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 CD300EQ496F6 205 aaPredicted RBP5.86□□□□□ -1.47
USP4-207ENST00000462673 NEGR1Q7Z3B1 354 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 BOD1L2Q8IYS8 172 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 OR8A1Q8NGG7 326 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 TIMM8BQ9Y5J9 83 aaPredicted RBP5.86□□□□□ -1.47
USP4-207ENST00000462673 SPCS1Q9Y6A9 102 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 SMAD5-AS1Q9Y6J3 95 aa5.86□□□□□ -1.47
USP4-207ENST00000462673 TRAV2A0A0B4J234 112 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 ARMS2P0C7Q2 107 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 HLA-DRB4P13762 266 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 ORM2P19652 201 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 LYZP61626 148 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 LINC00322Q6ZN03 302 aaPredicted RBP5.85□□□□□ -1.47
USP4-207ENST00000462673 PRNTQ86SH4 94 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 MRAPQ8TCY5 172 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 ZNF414Q96IQ9 312 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 ZFAND3Q9H8U3 227 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 MRPL36Q9P0J6 103 aaKnown RBP5.85□□□□□ -1.47
USP4-207ENST00000462673 HIGD1BQ9P298 99 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 HLA-DRB4X5D2U9 266 aa5.85□□□□□ -1.47
USP4-207ENST00000462673 IGHV3OR16-8A0A075B7F1 116 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 SERTM2A0A1B0GWG4 89 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 J3QR89 54 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 ZNF207O43670 478 aaKnown RBP5.84□□□□□ -1.47
USP4-207ENST00000462673 BUB3O43684 328 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 RPL7P18124 248 aaKnown RBP5.84□□□□□ -1.47
USP4-207ENST00000462673 ID1P41134 155 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 SNRPD3P62318 126 aaKnown RBP5.84□□□□□ -1.47
USP4-207ENST00000462673 CACNG7P62955 275 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 PSG3Q16557 428 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 ZNF493Q6ZR52 646 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 GOLT1AQ6ZVE7 132 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 ORMDL3Q8N138 153 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 PRELID3AQ96N28 172 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 FAM110AQ9BQ89 295 aa5.84□□□□□ -1.47
USP4-207ENST00000462673 SLC25A39Q9BZJ4 359 aaPredicted RBP5.84□□□□□ -1.47
USP4-207ENST00000462673 A0A1B0GV72 72 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 FBLL1A6NHQ2 334 aaKnown RBP5.83□□□□□ -1.48
USP4-207ENST00000462673 ZNF785A8K8V0 405 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 NCR2O95944 276 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 KRTAP10-11P60412 298 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 SIGLEC15Q6ZMC9 328 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 ADAMTSL5Q6ZMM2 481 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 TMEM61Q8N0U2 210 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 LYPD1Q8N2G4 141 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 IFI27L1Q96BM0 104 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 ZC2HC1AQ96GY0 325 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 SGK494Q96LW2 274 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 U3KQE9 123 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 U3KQK5 164 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 DNHD1Q96M86 4753 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 AGRNO00468 2067 aa5.83□□□□□ -1.48
USP4-207ENST00000462673 WNK1Q9H4A3 2382 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 A0A096LNJ9 63 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 A8MZ25 164 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 OR11H12B2RN74 326 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 D6R8Y8 96 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 H3BRN7 92 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 NHLRC4P0CG21 123 aaPredicted RBP5.82□□□□□ -1.48
USP4-207ENST00000462673 SMIM13P0DJ93 91 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 ZNF138P52744 262 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 MAP1LC3AQ9H492 121 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 PSG8Q9UQ74 426 aa5.82□□□□□ -1.48
USP4-207ENST00000462673 ANK2Q01484 3957 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IGKV3-7A0A075B6H7 116 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IGHV3OR16-13A0A075B7E8 117 aa5.81□□□□□ -1.48
USP4-207ENST00000462673 IGHV3-49A0A0A0MS15 119 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms