RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 NANOS2P60321 138 aaKnown RBP4.03□□□□□ -1.76
VPS36-202ENST00000462289 ZNF506Q5JVG8 444 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 FAM222AQ5U5X8 452 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 Q6ZTC4 211 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 RASL10AQ92737 203 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 FAM210BQ96KR6 192 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 C9orf85Q96MD7 179 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 NIPSNAP3BQ9BS92 247 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 NDUFAF3Q9BU61 184 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 TREM1Q9NP99 234 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 SCRT2Q9NQ03 307 aa4.03□□□□□ -1.76
VPS36-202ENST00000462289 TIMM8BQ9Y5J9 83 aaPredicted RBP4.03□□□□□ -1.76
VPS36-202ENST00000462289 HYDINQ4G0P3 5121 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 TRAV34A0A0B4J273 112 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 IGKV3D-20A0A0C4DH25 116 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 C9JCJ5 164 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 F6UZH7 168 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 H3BNG1 76 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 TEX46H3BTG2 121 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 PDE6DO43924 150 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 RNASE3P12724 160 aaKnown RBP4.02□□□□□ -1.77
VPS36-202ENST00000462289 RNASE4P34096 147 aaKnown RBP4.02□□□□□ -1.77
VPS36-202ENST00000462289 UBE2G2P60604 165 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 SMUG1Q53HV7 270 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 C10orf25Q5T742 122 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 IQCF2Q8IXL9 164 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 NRACQ8N912 160 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
VPS36-202ENST00000462289 ZC2HC1AQ96GY0 325 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 FAM210AQ96ND0 272 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 LINC01587Q99440 93 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 DERL1Q9BUN8 251 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 VAX2Q9UIW0 290 aa4.02□□□□□ -1.77
VPS36-202ENST00000462289 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 LCE6AA0A183 80 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 C19orf71A6NCJ1 209 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 CXorf65A6NEN9 183 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 CBY3A6NI87 242 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 NXPH4O95158 308 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 GCGP01275 180 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 IFNA7P01567 189 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 TYMSP04818 313 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 RPL35P42766 123 aaKnown RBP4.01□□□□□ -1.77
VPS36-202ENST00000462289 IFITM2Q01629 132 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 CST9LP1Q5W188 147 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 POM121L12Q8N7R1 296 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 KCNS1Q96KK3 526 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 SGK494Q96LW2 274 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 SPXQ9BT56 116 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 NDFIP1Q9BT67 221 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 SMDT1Q9H4I9 107 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 IL36BQ9NZH7 164 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 MDFICQ9P1T7 246 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 GNG13Q9P2W3 67 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 APLNQ9ULZ1 77 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 LY96Q9Y6Y9 160 aa4.01□□□□□ -1.77
VPS36-202ENST00000462289 IGHV3OR16-12A0A075B7B8 117 aa4□□□□□ -1.77
VPS36-202ENST00000462289 RBFOX3A6NFN3 312 aa4□□□□□ -1.77
VPS36-202ENST00000462289 FABP5P3A8MUU1 101 aa4□□□□□ -1.77
VPS36-202ENST00000462289 KRBOX1C9JBD0 128 aa4□□□□□ -1.77
VPS36-202ENST00000462289 AKR1C3P42330 323 aa4□□□□□ -1.77
VPS36-202ENST00000462289 FAM162BQ5T6X4 162 aa4□□□□□ -1.77
VPS36-202ENST00000462289 KRTAP5-11Q6L8G4 156 aa4□□□□□ -1.77
VPS36-202ENST00000462289 UFSP1Q6NVU6 142 aa4□□□□□ -1.77
VPS36-202ENST00000462289 Q6ZTI0 123 aa4□□□□□ -1.77
VPS36-202ENST00000462289 PRNTQ86SH4 94 aa4□□□□□ -1.77
VPS36-202ENST00000462289 TMEM208Q9BTX3 173 aa4□□□□□ -1.77
VPS36-202ENST00000462289 CNFNQ9BYD5 112 aa4□□□□□ -1.77
VPS36-202ENST00000462289 NOP10Q9NPE3 64 aaKnown RBP4□□□□□ -1.77
VPS36-202ENST00000462289 GSN-AS1Q9NRJ2 163 aa4□□□□□ -1.77
VPS36-202ENST00000462289 DNAH2Q9P225 4427 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 FRAS1Q86XX4 4008 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 A0A087WWL8 130 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 DEFB131BA0A096LNP1 70 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 A0A1B0GV50 99 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 M0R2P5 195 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 GNRH2O43555 120 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 SNAI2O43623 268 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 SH2D1AO60880 128 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 IFNA1P01562 189 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 ATP5G1P05496 136 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 ZNF415Q09FC8 603 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 CENPWQ5EE01 88 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 LGALS9CQ6DKI2 356 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 FAM159AQ6UWV7 190 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 BAGE2Q86Y30 109 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 SDF2L1Q9HCN8 221 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 MED9Q9NWA0 146 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 RPH3ALQ9UNE2 315 aa3.99□□□□□ -1.77
VPS36-202ENST00000462289 KLK5Q9Y337 293 aaPredicted RBP3.99□□□□□ -1.77
VPS36-202ENST00000462289 IGHV4-4A0A075B6R2 117 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 SNURFLB1AK76 121 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 C9JQL5 133 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 J3KRW8 73 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 K7EN84 100 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 CIDEAO60543 219 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 SRP19P09132 144 aaKnown RBP3.98□□□□□ -1.77
VPS36-202ENST00000462289 OR5AL1P0C617 328 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 IGLC6P0CF74 106 aa3.98□□□□□ -1.77
VPS36-202ENST00000462289 LINC00694P0DN24 101 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms