RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 GRIFINA4D1Z8 144 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 C19orf71A6NCJ1 209 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 PGPEP1LA6NFU8 196 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 H3BVH4 76 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 ARMS2P0C7Q2 107 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 MED14OSP0DP75 135 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 HOXA5P20719 270 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RPS20P60866 119 aaKnown RBP8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RPL19P84098 196 aaKnown RBP8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SLAQ13239 276 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 CLLU1Q5K131 121 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SMIM7Q9BQ49 75 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 LY96Q9Y6Y9 160 aa8.2□□□□□ -1.1
TRAF3IP1-204ENST00000462122 LCE6AA0A183 80 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 XKRY2A2RUG3 117 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 H3BNG1 76 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 CIDEAO60543 219 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 P01737 135 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 IFITM2Q01629 132 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 FAM74A3Q4VXF1 159 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 ZNF575Q86XF7 245 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SYT8Q8NBV8 401 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 OR4C5Q8NGB2 326 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SCRT2Q9NQ03 307 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 PHLDA3Q9Y5J5 127 aa8.19□□□□□ -1.1
TRAF3IP1-204ENST00000462122 VPS13DQ5THJ4 4388 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 TRAV26-1A0A087WT03 109 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 ZNF727A8MUV8 499 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 IGHV3-53P01767 116 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 LGALS9CQ6DKI2 356 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 OCC1Q8TAD7 63 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 LINC00476Q8WZB0 136 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 ZNF479Q96JC4 524 aa8.18□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RYR2Q92736 4967 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RYR3Q15413 4870 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 TRGV4A0A0C4DH28 118 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 A8MWV9 139 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 K7EN84 100 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SNAI2O43623 268 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 OR5AL1P0C617 328 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SFTA3P0C7M3 94 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SRSF3P84103 164 aaKnown RBP8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 FHL2Q14192 279 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 ZFP82Q8N141 532 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 POM121L12Q8N7R1 296 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 OR2D3Q8NGH3 330 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 PRO0255Q9UI72 69 aa8.17□□□□□ -1.1
TRAF3IP1-204ENST00000462122 C9JQL5 133 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RS1O15537 224 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 P0DMU3 169 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 FAM231AP0DMU4 169 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 FAM231CP0DMU5 169 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 CFAP126Q5VTH2 177 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 LINC01551Q86U37 167 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 NUDT10Q8NFP7 164 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 NUDT11Q96G61 164 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SSBP4Q9BWG4 385 aaPredicted RBP8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 HHLA3Q9XRX5 114 aa8.16□□□□□ -1.1
TRAF3IP1-204ENST00000462122 MUC4Q99102 2169 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 A0A0J9YY99 117 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 M0R381 172 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 LY6G6CO95867 125 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 NUDT3O95989 172 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 CRYBA4P53673 196 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 TMEM241Q24JQ0 296 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 SOHLH1Q5JUK2 328 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 ZFP2Q6ZN57 461 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 FER1L6-AS1Q8NA97 138 aa8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RNASE7Q9H1E1 156 aaKnown RBP8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 RPP21Q9H633 154 aaKnown RBP8.15□□□□□ -1.1
TRAF3IP1-204ENST00000462122 KMT2AQ03164 3969 aa8.15□□□□□ -1.11
TRAF3IP1-204ENST00000462122 HYDINQ4G0P3 5121 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 A0A1W2PPQ1 181 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 RHODO00212 210 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 PAX4O43316 350 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 NXPH4O95158 308 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 IGLC6P0CF74 106 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 GATA1P15976 413 aaPredicted RBP8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 ERVFC1-1P60608 527 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 OR10AG1Q8NH19 301 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 VSIG2Q96IQ7 327 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 NAT8Q9UHE5 227 aa8.14□□□□□ -1.11
TRAF3IP1-204ENST00000462122 F2Z2F3 143 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 GATCO43716 136 aaKnown RBP8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 GZMBP10144 247 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 CT83Q5H943 113 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SPANXN1Q5VSR9 72 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 SFRP2Q96HF1 295 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 TPPP3Q9BW30 176 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 ICOSQ9Y6W8 199 aa8.13□□□□□ -1.11
TRAF3IP1-204ENST00000462122 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 TRBV6-4A0A1B0GX49 114 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 A8MWL6 223 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 RPL23P62829 140 aaKnown RBP8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 CACNG7P62955 275 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 RHOHQ15669 191 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 ADIRFQ15847 76 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 RNF212Q495C1 297 aa8.12□□□□□ -1.11
TRAF3IP1-204ENST00000462122 UQCC3Q6UW78 93 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms