RNA–Protein interactions for RNA: ENST00000461154.1

SHANK1-205, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 4

Gene SHANK1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-205ENST00000461154 H3BNG1 76 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 ARMS2P0C7Q2 107 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 P0DMU3 169 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 FAM231AP0DMU4 169 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 FAM231CP0DMU5 169 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 PIK3CD-AS1Q5SR53 167 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 SYT8Q8NBV8 401 aa11.39□□□□□ -0.59
SHANK1-205ENST00000461154 PGPEP1LA6NFU8 196 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 CIDEAO60543 219 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 NUDT3O95989 172 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 MED14OSP0DP75 135 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 PEA15Q15121 130 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 SMDT1Q9H4I9 107 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 PRO0255Q9UI72 69 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 PHLDA3Q9Y5J5 127 aa11.38□□□□□ -0.59
SHANK1-205ENST00000461154 LYSTQ99698 3801 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 A0A0J9YY99 117 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 P01737 135 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 SRP19P09132 144 aaKnown RBP11.37□□□□□ -0.59
SHANK1-205ENST00000461154 SFTA3P0C7M3 94 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 RPS20P60866 119 aaKnown RBP11.37□□□□□ -0.59
SHANK1-205ENST00000461154 RPL19P84098 196 aaKnown RBP11.37□□□□□ -0.59
SHANK1-205ENST00000461154 OCC1Q8TAD7 63 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 ZNF479Q96JC4 524 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 SMIM7Q9BQ49 75 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 LY96Q9Y6Y9 160 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 MUC4Q99102 2169 aa11.37□□□□□ -0.59
SHANK1-205ENST00000461154 XKRY2A2RUG3 117 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 C19orf71A6NCJ1 209 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 A8MWV9 139 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 PAX4O43316 350 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 FHL2Q14192 279 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 ZFP82Q8N141 532 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 POM121L12Q8N7R1 296 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 OR2D3Q8NGH3 330 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 SCRT2Q9NQ03 307 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 HHLA3Q9XRX5 114 aa11.36□□□□□ -0.59
SHANK1-205ENST00000461154 ALMS1Q8TCU4 4167 aa11.35□□□□□ -0.59
SHANK1-205ENST00000461154 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
SHANK1-205ENST00000461154 RS1O15537 224 aa11.35□□□□□ -0.59
SHANK1-205ENST00000461154 CFAP126Q5VTH2 177 aa11.35□□□□□ -0.59
SHANK1-205ENST00000461154 ZNF575Q86XF7 245 aa11.35□□□□□ -0.59
SHANK1-205ENST00000461154 UBE2DNLQ8IWF7 75 aa11.35□□□□□ -0.59
SHANK1-205ENST00000461154 OR5AL1P0C617 328 aa11.34□□□□□ -0.59
SHANK1-205ENST00000461154 CRYBA4P53673 196 aa11.34□□□□□ -0.59
SHANK1-205ENST00000461154 FAM74A3Q4VXF1 159 aa11.34□□□□□ -0.59
SHANK1-205ENST00000461154 VSIG2Q96IQ7 327 aa11.34□□□□□ -0.59
SHANK1-205ENST00000461154 SACSQ9NZJ4 4579 aa11.34□□□□□ -0.59
SHANK1-205ENST00000461154 DNAH1Q9P2D7 4330 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 K7EN84 100 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 M0R381 172 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 SNAI2O43623 268 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 RNF212Q495C1 297 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 NUDT10Q8NFP7 164 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 NUDT11Q96G61 164 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 SSBP4Q9BWG4 385 aaPredicted RBP11.33□□□□□ -0.6
SHANK1-205ENST00000461154 ICOSQ9Y6W8 199 aa11.33□□□□□ -0.6
SHANK1-205ENST00000461154 CCL18P55774 89 aa11.32□□□□□ -0.6
SHANK1-205ENST00000461154 CLLU1Q5K131 121 aa11.32□□□□□ -0.6
SHANK1-205ENST00000461154 DMRTA1Q5VZB9 504 aa11.32□□□□□ -0.6
SHANK1-205ENST00000461154 ZFP2Q6ZN57 461 aa11.32□□□□□ -0.6
SHANK1-205ENST00000461154 RPP21Q9H633 154 aaKnown RBP11.32□□□□□ -0.6
SHANK1-205ENST00000461154 RHODO00212 210 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 GATA1P15976 413 aaPredicted RBP11.31□□□□□ -0.6
SHANK1-205ENST00000461154 SPANXN1Q5VSR9 72 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 FAM231DQ6ZW35 169 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 LINC01551Q86U37 167 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 FER1L6-AS1Q8NA97 138 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 SFRP2Q96HF1 295 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 RNASE7Q9H1E1 156 aaKnown RBP11.31□□□□□ -0.6
SHANK1-205ENST00000461154 RYR2Q92736 4967 aa11.31□□□□□ -0.6
SHANK1-205ENST00000461154 A0A096LPF7 62 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 IGHV3-73A0A0B4J1V6 119 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 A0A1W2PPQ1 181 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 C9JQL5 133 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 NXPH4O95158 308 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 FAM3BP58499 235 aaPredicted RBP11.3□□□□□ -0.6
SHANK1-205ENST00000461154 ERVFC1-1P60608 527 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 SRSF3P84103 164 aaKnown RBP11.3□□□□□ -0.6
SHANK1-205ENST00000461154 IFITM2Q01629 132 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 MRPL23Q16540 153 aaKnown RBP11.3□□□□□ -0.6
SHANK1-205ENST00000461154 TMEM241Q24JQ0 296 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 OR10AG1Q8NH19 301 aa11.3□□□□□ -0.6
SHANK1-205ENST00000461154 NACAE9PAV3 2078 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 TRBV6-4A0A1B0GX49 114 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 F2Z2F3 143 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 GATCO43716 136 aaKnown RBP11.29□□□□□ -0.6
SHANK1-205ENST00000461154 IGLC6P0CF74 106 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 GZMBP10144 247 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 RHOHQ15669 191 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 SOHLH1Q5JUK2 328 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 PRADC1Q9BSG0 188 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 TPPP3Q9BW30 176 aa11.29□□□□□ -0.6
SHANK1-205ENST00000461154 GYPEP15421 78 aa11.28□□□□□ -0.6
SHANK1-205ENST00000461154 SRIP30626 198 aa11.28□□□□□ -0.6
SHANK1-205ENST00000461154 CACNG7P62955 275 aa11.28□□□□□ -0.6
SHANK1-205ENST00000461154 FAM74A4Q5TZK3 123 aa11.28□□□□□ -0.6
SHANK1-205ENST00000461154 SLC25A29Q8N8R3 303 aa11.28□□□□□ -0.6
SHANK1-205ENST00000461154 JPT2Q9H910 190 aa11.28□□□□□ -0.6
SHANK1-205ENST00000461154 NAT8Q9UHE5 227 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms