RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, human

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRD-208	ENST00000460627		U3KQE9	123 aa		13.62	□□□□□ -0.23
CHRD-208	ENST00000460627	IGLC2	P0DOY2	106 aa		13.62	□□□□□ -0.23
CHRD-208	ENST00000460627	C9orf47	Q6ZRZ4	202 aa		13.62	□□□□□ -0.23
CHRD-208	ENST00000460627		A0A087X0K7	114 aa		13.61	□□□□□ -0.23
CHRD-208	ENST00000460627	C1orf229	Q6ZS94	237 aa	Predicted RBP	13.61	□□□□□ -0.23
CHRD-208	ENST00000460627	CHAC1	Q9BUX1	264 aa		13.61	□□□□□ -0.23
CHRD-208	ENST00000460627	ZMAT4	Q9H898	229 aa		13.61	□□□□□ -0.23
CHRD-208	ENST00000460627	IGKV1D-37	A0A075B6S9	117 aa		13.61	□□□□□ -0.23
CHRD-208	ENST00000460627	PSCA	O43653	123 aa		13.61	□□□□□ -0.23
CHRD-208	ENST00000460627	CITED2	Q99967	270 aa	Predicted RBP	13.61	□□□□□ -0.23
CHRD-208	ENST00000460627		A0A1B0GWB2	263 aa		13.61	□□□□□ -0.23
CHRD-208	ENST00000460627		K7EMI3	77 aa		13.6	□□□□□ -0.23
CHRD-208	ENST00000460627	PAX4	O43316	350 aa		13.6	□□□□□ -0.23
CHRD-208	ENST00000460627	CRYGB	P07316	175 aa		13.6	□□□□□ -0.23
CHRD-208	ENST00000460627	NOP10	Q9NPE3	64 aa	Known RBP	13.6	□□□□□ -0.23
CHRD-208	ENST00000460627	ERG28	Q9UKR5	140 aa		13.6	□□□□□ -0.23
CHRD-208	ENST00000460627	UNQ9165/PRO28630	Q6UXU0	137 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	INSL3	P51460	131 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	ASPHD1	Q5U4P2	390 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	CDSN	Q15517	529 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	S100A7L2	Q5SY68	101 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	IGF2BP2-AS1	Q96M15	143 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	CCDC140	Q96MF4	163 aa		13.59	□□□□□ -0.23
CHRD-208	ENST00000460627	HLA-DRB4	P13762	266 aa		13.58	□□□□□ -0.23
CHRD-208	ENST00000460627	C11orf68	Q9H3H3	251 aa	Known RBP	13.58	□□□□□ -0.23
CHRD-208	ENST00000460627	HLA-DRB4	X5D2U9	266 aa		13.58	□□□□□ -0.23
CHRD-208	ENST00000460627	LINC01548	A6NM66	108 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	ZNF479	Q96JC4	524 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	USP9X	Q93008	2570 aa	Predicted RBP	13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	IGHV3-38	A0A0C4DH36	116 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	TRBV6-1	A0A0K0K1D8	114 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	PRAC2	D3DTV9	90 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	TRBV12-3	P01733	135 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	TMEM61	Q8N0U2	210 aa		13.58	□□□□□ -0.24
CHRD-208	ENST00000460627	IGHV1-24	A0A0C4DH33	117 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	PAX2	Q02962	417 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	JPT2	Q9H910	190 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	KLF5	Q13887	457 aa	Predicted RBP	13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	TEX48	A0A1B0GUV7	120 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	ESD	P10768	282 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	LGALS9B	Q3B8N2	356 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	LGALS9C	Q6DKI2	356 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	PIFO	Q8TCI5	191 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	C16orf74	Q96GX8	76 aa		13.57	□□□□□ -0.24
CHRD-208	ENST00000460627	TLN2	Q9Y4G6	2542 aa		13.56	□□□□□ -0.24
CHRD-208	ENST00000460627	NEGR1	Q7Z3B1	354 aa		13.56	□□□□□ -0.24
CHRD-208	ENST00000460627	PRRC2A	P48634	2157 aa	Known RBP	13.56	□□□□□ -0.24
CHRD-208	ENST00000460627	PLXNB1	O43157	2135 aa		13.56	□□□□□ -0.24
CHRD-208	ENST00000460627	GAGE6	Q13070	117 aa		13.56	□□□□□ -0.24
CHRD-208	ENST00000460627	SFTA2	Q6UW10	78 aa		13.55	□□□□□ -0.24
CHRD-208	ENST00000460627	STPG4	Q8N801	248 aa		13.55	□□□□□ -0.24
CHRD-208	ENST00000460627	ZNF295-AS1	Q8N0V1	137 aa		13.55	□□□□□ -0.24
CHRD-208	ENST00000460627	USP9Y	O00507	2555 aa	Predicted RBP	13.55	□□□□□ -0.24
CHRD-208	ENST00000460627		F8VRH5	84 aa		13.55	□□□□□ -0.24
CHRD-208	ENST00000460627	ZNF664	Q8N3J9	261 aa		13.54	□□□□□ -0.24
CHRD-208	ENST00000460627	C20orf144	Q9BQM9	153 aa		13.54	□□□□□ -0.24
CHRD-208	ENST00000460627	ZFYVE26	Q68DK2	2539 aa		13.53	□□□□□ -0.24
CHRD-208	ENST00000460627	DLX4	Q92988	240 aa	Predicted RBP	13.53	□□□□□ -0.24
CHRD-208	ENST00000460627	SPART-AS1	P0CW21	52 aa		13.52	□□□□□ -0.24
CHRD-208	ENST00000460627	MED14OS	P0DP75	135 aa		13.52	□□□□□ -0.24
CHRD-208	ENST00000460627		A0A0J9YX75	114 aa		13.52	□□□□□ -0.24
CHRD-208	ENST00000460627	DNAJC30	Q96LL9	226 aa		13.52	□□□□□ -0.24
CHRD-208	ENST00000460627	SORL1	Q92673	2214 aa		13.52	□□□□□ -0.25
CHRD-208	ENST00000460627	MPV17L2	Q567V2	206 aa		13.52	□□□□□ -0.25
CHRD-208	ENST00000460627	ADAMTSL5	Q6ZMM2	481 aa		13.52	□□□□□ -0.25
CHRD-208	ENST00000460627	ZNF561-AS1	K7EIQ3	104 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	LGALS9	O00182	355 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	LEPROT	O15243	131 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	SCGB1A1	P11684	91 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627		Q6ZWC4	215 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	JMJD1C	Q15652	2540 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	ZNF503	Q96F45	646 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	SAMD5	Q5TGI4	173 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	RMI2	Q96E14	147 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	MRPL35	Q9NZE8	188 aa	Known RBP	13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	PLA2G2A	P14555	144 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	MRPL52	Q86TS9	123 aa	Known RBP	13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	NDUFA11	Q86Y39	141 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	CST9L	Q9H4G1	147 aa		13.51	□□□□□ -0.25
CHRD-208	ENST00000460627	HIST2H2BC	Q6DN03	193 aa		13.5	□□□□□ -0.25
CHRD-208	ENST00000460627	ATP5G1	P05496	136 aa		13.5	□□□□□ -0.25
CHRD-208	ENST00000460627	NPC2	P61916	151 aa		13.5	□□□□□ -0.25
CHRD-208	ENST00000460627		Q8N1Y9	231 aa		13.5	□□□□□ -0.25
CHRD-208	ENST00000460627		Q8N6K4	173 aa		13.5	□□□□□ -0.25
CHRD-208	ENST00000460627	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	13.49	□□□□□ -0.25
CHRD-208	ENST00000460627	ABCA12	Q86UK0	2595 aa		13.49	□□□□□ -0.25
CHRD-208	ENST00000460627	COA6	Q5JTJ3	125 aa	Known RBP	13.49	□□□□□ -0.25
CHRD-208	ENST00000460627	HERVK_113	P63121	156 aa		13.49	□□□□□ -0.25
CHRD-208	ENST00000460627	ANG	P03950	147 aa	Known RBP	13.48	□□□□□ -0.25
CHRD-208	ENST00000460627		Q6ZSV7	163 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	MSRB1	Q9NZV6	116 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	SPRY2	O43597	315 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	KIAA1549	Q9HCM3	1950 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	CTRL	P40313	264 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	ATXN8	Q156A1	80 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	SH2D6	Q7Z4S9	175 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	MRAP	Q8TCY5	172 aa		13.48	□□□□□ -0.25
CHRD-208	ENST00000460627	INAFM1	C9JVW0	142 aa		13.47	□□□□□ -0.25
CHRD-208	ENST00000460627	VWC2L	B2RUY7	222 aa		13.47	□□□□□ -0.25
CHRD-208	ENST00000460627	ZNF747	Q9BV97	191 aa		13.47	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms