RNA–Protein interactions for RNA: ENST00000460378.1

EPB41-208, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best)

Gene EPB41, Length 5,212 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-208ENST00000460378 COL27A1Q8IZC6 1860 aaPredicted RBP7.45□□□□□ -1.22
EPB41-208ENST00000460378 CXCL1P09341 107 aa7.45□□□□□ -1.22
EPB41-208ENST00000460378 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
EPB41-208ENST00000460378 TMEM263Q8WUH6 116 aaKnown RBP7.45□□□□□ -1.22
EPB41-208ENST00000460378 TMEM170AQ8WVE7 144 aa7.45□□□□□ -1.22
EPB41-208ENST00000460378 C18orf15Q96N68 181 aa7.45□□□□□ -1.22
EPB41-208ENST00000460378 COL6A3P12111 3177 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 RBMY1BA6NDE4 496 aaKnown RBP7.44□□□□□ -1.22
EPB41-208ENST00000460378 RBMY1EA6NEQ0 496 aaKnown RBP7.44□□□□□ -1.22
EPB41-208ENST00000460378 PGPEP1LA6NFU8 196 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 ADARB2-AS1A8MUL3 147 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 RBMY1DP0C7P1 496 aaKnown RBP7.44□□□□□ -1.22
EPB41-208ENST00000460378 ALKBH7Q9BT30 221 aaPredicted RBP7.44□□□□□ -1.22
EPB41-208ENST00000460378 WFDC1Q9HC57 220 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 SZT2Q5T011 3432 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 K7EQG2 157 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 PAPPA-AS1Q5QFB9 102 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 MRPL16Q9NX20 251 aaKnown RBP7.44□□□□□ -1.22
EPB41-208ENST00000460378 PRO0255Q9UI72 69 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 M0R2P5 195 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 PEX7O00628 323 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 WIPF1O43516 503 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 CACNG7P62955 275 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 HIST3H2BBQ8N257 126 aa7.44□□□□□ -1.22
EPB41-208ENST00000460378 BUB3O43684 328 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 APOMO95445 188 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 EXOC3-AS1Q8N2X6 119 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 MUC21A0A0G2JKD1 596 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 MUC21A0A140T8X8 626 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 SMIM13P0DJ93 91 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 Q6ZPA2 131 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 MRPL53Q96EL3 112 aaKnown RBP7.43□□□□□ -1.22
EPB41-208ENST00000460378 ZNF414Q96IQ9 312 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 PMCHL2Q9BQD1 86 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 HHLA3Q9XRX5 114 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 IGHV3-16A0A0C4DH30 117 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 CYTL1Q9NRR1 136 aa7.43□□□□□ -1.22
EPB41-208ENST00000460378 ERCC8Q13216 396 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 PYY3Q5JQD4 70 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 RNASE7Q9H1E1 156 aaKnown RBP7.42□□□□□ -1.22
EPB41-208ENST00000460378 COX6CP09669 75 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 THAP8Q8NA92 274 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 TRAV26-1A0A087WT03 109 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 IZUMO1RA6ND01 250 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 H3BMM0 161 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 SIVA1O15304 175 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 APOHP02749 345 aaPredicted RBP7.42□□□□□ -1.22
EPB41-208ENST00000460378 UBE2WQ96B02 151 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 EPDR1Q9UM22 224 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
EPB41-208ENST00000460378 ZNF561-AS1K7EIQ3 104 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 CRYGBP07316 175 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 VSIRQ9H7M9 311 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 ATP6V0E2Q8NHE4 81 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 IGHV4-4A0A075B6R2 117 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 TRAV8-1A0A0A6YYK1 113 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 A0A0J9YX75 114 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 SSBP2P81877 361 aaPredicted RBP7.41□□□□□ -1.22
EPB41-208ENST00000460378 SSBP4Q9BWG4 385 aaPredicted RBP7.41□□□□□ -1.22
EPB41-208ENST00000460378 SPCS1Q9Y6A9 102 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 IGHV3-30P01768 117 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 IGHV3-33P01772 117 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 IGHV3-30-3P0DP02 117 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 IGHV3-30-5P0DP03 117 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 Q8TAT8 98 aa7.41□□□□□ -1.22
EPB41-208ENST00000460378 TRBV20OR9-2A0A075B6H5 130 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 SS18Q15532 418 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 A0A1B0GV72 72 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 A0A1B0GWB2 263 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 H3BUT2 72 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 IGKV1-17P01599 117 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 ANGP03950 147 aaKnown RBP7.4□□□□□ -1.22
EPB41-208ENST00000460378 GZMBP10144 247 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 UTF1Q5T230 341 aa7.4□□□□□ -1.22
EPB41-208ENST00000460378 FNDC4Q9H6D8 234 aaPredicted RBP7.4□□□□□ -1.22
EPB41-208ENST00000460378 HIGD1CA8MV81 97 aa7.4□□□□□ -1.23
EPB41-208ENST00000460378 TMEM14EPQ6UXP3 125 aa7.4□□□□□ -1.23
EPB41-208ENST00000460378 TRBV24-1A0A075B6N3 115 aa7.4□□□□□ -1.23
EPB41-208ENST00000460378 OCC1Q8TAD7 63 aa7.4□□□□□ -1.23
EPB41-208ENST00000460378 GEMIN7Q9H840 131 aaKnown RBP7.4□□□□□ -1.23
EPB41-208ENST00000460378 TYMSP04818 313 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 GCSAMLQ5JQS6 135 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 KPRPQ5T749 579 aaPredicted RBP7.39□□□□□ -1.23
EPB41-208ENST00000460378 PRELID3AQ96N28 172 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 A0A1B0GUT8 65 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 DERL1Q9BUN8 251 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 KMT2BQ9UMN6 2715 aaPredicted RBP7.39□□□□□ -1.23
EPB41-208ENST00000460378 A0A1W2PRE2 83 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 INS-IGF2F8WCM5 200 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 PROP1O75360 226 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 ADCYAP1P18509 176 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 Q6ZRM9 215 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 CRYGDP07320 174 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 SUMO2P61956 95 aaKnown RBP7.39□□□□□ -1.23
EPB41-208ENST00000460378 MGST2Q99735 147 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
EPB41-208ENST00000460378 A0A0G2JRQ6 117 aa7.38□□□□□ -1.23
EPB41-208ENST00000460378 LGALS3P17931 250 aaKnown RBP7.38□□□□□ -1.23
EPB41-208ENST00000460378 POM121L12Q8N7R1 296 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms