RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 MLST8Q9BVC4 326 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 BIN3Q9NQY0 253 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 LINC00588Q9Y4M8 146 aa11.23□□□□□ -0.61
CD28-203ENST00000458610 SACSQ9NZJ4 4579 aa11.22□□□□□ -0.61
CD28-203ENST00000458610 PGPEP1LA6NFU8 196 aa11.22□□□□□ -0.61
CD28-203ENST00000458610 A8MWV9 139 aa11.22□□□□□ -0.61
CD28-203ENST00000458610 ARMS2P0C7Q2 107 aa11.22□□□□□ -0.61
CD28-203ENST00000458610 SH2D6Q7Z4S9 175 aa11.22□□□□□ -0.61
CD28-203ENST00000458610 MUC4Q99102 2169 aa11.22□□□□□ -0.61
CD28-203ENST00000458610 GRIFINA4D1Z8 144 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 GNG4P50150 75 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 ESRGQ1W209 222 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 ZNF506Q5JVG8 444 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 CFAP126Q5VTH2 177 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 NEGR1Q7Z3B1 354 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 DAZAP1Q96EP5 407 aaKnown RBP11.21□□□□□ -0.61
CD28-203ENST00000458610 PHLDA3Q9Y5J5 127 aa11.21□□□□□ -0.61
CD28-203ENST00000458610 IGLV2-18A0A075B6J9 118 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 TMSB15BA0A087X1C1 80 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 H3BVH4 76 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 M0R2N4 97 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 CXCL1P09341 107 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 SRIP30626 198 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 CENPWQ5EE01 88 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 SOHLH1Q5JUK2 328 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 PRR27Q6MZM9 219 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 ZFP2Q6ZN57 461 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 PRADC1Q9BSG0 188 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 UPK3BQ9BT76 320 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 Q9H8V8 135 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 MRPS16Q9Y3D3 137 aaKnown RBP11.2□□□□□ -0.62
CD28-203ENST00000458610 BOLA1Q9Y3E2 137 aa11.2□□□□□ -0.62
CD28-203ENST00000458610 TRBV6-4A0A1B0GX49 114 aa11.19□□□□□ -0.62
CD28-203ENST00000458610 RBFOX3A6NFN3 312 aa11.19□□□□□ -0.62
CD28-203ENST00000458610 GYPEP15421 78 aa11.19□□□□□ -0.62
CD28-203ENST00000458610 GATA1P15976 413 aaPredicted RBP11.19□□□□□ -0.62
CD28-203ENST00000458610 LYPD6BQ8NI32 183 aa11.19□□□□□ -0.62
CD28-203ENST00000458610 DERL1Q9BUN8 251 aa11.19□□□□□ -0.62
CD28-203ENST00000458610 MGST1P10620 155 aaKnown RBP11.18□□□□□ -0.62
CD28-203ENST00000458610 RPS20P60866 119 aaKnown RBP11.18□□□□□ -0.62
CD28-203ENST00000458610 LINC00336Q6ZUF6 198 aa11.18□□□□□ -0.62
CD28-203ENST00000458610 ZFP82Q8N141 532 aa11.18□□□□□ -0.62
CD28-203ENST00000458610 LYSTQ99698 3801 aa11.18□□□□□ -0.62
CD28-203ENST00000458610 SCRT2Q9NQ03 307 aa11.18□□□□□ -0.62
CD28-203ENST00000458610 RAB19A4D1S5 217 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 TMEM250H0YL14 139 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 K7EQD1 137 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 RHODO00212 210 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 RHOHQ15669 191 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 TTC32Q5I0X7 151 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 LYPD5Q6UWN5 251 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 Q6ZR54 194 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 DNAH1Q9P2D7 4330 aa11.17□□□□□ -0.62
CD28-203ENST00000458610 NBDYA0A0U1RRE5 68 aa11.16□□□□□ -0.62
CD28-203ENST00000458610 XKRY2A2RUG3 117 aa11.16□□□□□ -0.62
CD28-203ENST00000458610 DMRTA1Q5VZB9 504 aa11.16□□□□□ -0.62
CD28-203ENST00000458610 FAM210AQ96ND0 272 aa11.16□□□□□ -0.62
CD28-203ENST00000458610 PARLQ9H300 379 aa11.16□□□□□ -0.62
CD28-203ENST00000458610 IGHV3-73A0A0B4J1V6 119 aa11.15□□□□□ -0.62
CD28-203ENST00000458610 M0R381 172 aa11.15□□□□□ -0.62
CD28-203ENST00000458610 NDUFS6O75380 124 aaKnown RBP11.15□□□□□ -0.62
CD28-203ENST00000458610 C1orf134Q5TEV5 83 aa11.15□□□□□ -0.62
CD28-203ENST00000458610 SLC25A29Q8N8R3 303 aa11.15□□□□□ -0.62
CD28-203ENST00000458610 EIF5A2Q9GZV4 153 aaKnown RBP11.15□□□□□ -0.62
CD28-203ENST00000458610 A0A1W2PPQ1 181 aa11.14□□□□□ -0.63
CD28-203ENST00000458610 P01737 135 aa11.14□□□□□ -0.63
CD28-203ENST00000458610 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
CD28-203ENST00000458610 ZNF575Q86XF7 245 aa11.14□□□□□ -0.63
CD28-203ENST00000458610 SFRP2Q96HF1 295 aa11.14□□□□□ -0.63
CD28-203ENST00000458610 SSBP4Q9BWG4 385 aaPredicted RBP11.14□□□□□ -0.63
CD28-203ENST00000458610 SIVA1O15304 175 aa11.13□□□□□ -0.63
CD28-203ENST00000458610 IGLV2-8P01709 118 aa11.13□□□□□ -0.63
CD28-203ENST00000458610 RPL19P84098 196 aaKnown RBP11.13□□□□□ -0.63
CD28-203ENST00000458610 SPANXN1Q5VSR9 72 aa11.13□□□□□ -0.63
CD28-203ENST00000458610 OR2D3Q8NGH3 330 aa11.13□□□□□ -0.63
CD28-203ENST00000458610 TRAV9-2A0A087WT02 112 aa11.12□□□□□ -0.63
CD28-203ENST00000458610 SNAI2O43623 268 aa11.12□□□□□ -0.63
CD28-203ENST00000458610 NXPH4O95158 308 aa11.12□□□□□ -0.63
CD28-203ENST00000458610 BTF3P20290 206 aaKnown RBP11.12□□□□□ -0.63
CD28-203ENST00000458610 TIRAPP58753 221 aa11.12□□□□□ -0.63
CD28-203ENST00000458610 TEX261Q6UWH6 196 aa11.12□□□□□ -0.63
CD28-203ENST00000458610 C19orf71A6NCJ1 209 aa11.11□□□□□ -0.63
CD28-203ENST00000458610 S100A1P23297 94 aa11.11□□□□□ -0.63
CD28-203ENST00000458610 TOR2AQ5JU69 321 aa11.11□□□□□ -0.63
CD28-203ENST00000458610 FAM74A4Q5TZK3 123 aa11.11□□□□□ -0.63
CD28-203ENST00000458610 JPT2Q9H910 190 aa11.11□□□□□ -0.63
CD28-203ENST00000458610 HYDINQ4G0P3 5121 aa11.11□□□□□ -0.63
CD28-203ENST00000458610 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 TRBV20OR9-2A0A075B6H5 130 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 LOC100131303A0A0U1RQF7 123 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 F2Z2F3 143 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 K7EP13 123 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 UFSP1Q6NVU6 142 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 C6orf223Q8N319 242 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 FER1L6-AS1Q8NA97 138 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 ATP6V0E2Q8NHE4 81 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 OCC1Q8TAD7 63 aa11.1□□□□□ -0.63
CD28-203ENST00000458610 SAMD10Q9BYL1 202 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms